RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 CCDC71LQ8N9Z2 235 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 PLPPR1Q8TBJ4 325 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 FAM57AQ8TBR7 257 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 PLEKHF2Q9H8W4 249 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 PLSCR4Q9NRQ2 329 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 GNG13Q9P2W3 67 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 NKX2-1P43699 371 aaPredicted RBP12.6□□□□□ -0.39
CHFR-223ENST00000544268 CEBPDP49716 269 aaPredicted RBP12.6□□□□□ -0.39
CHFR-223ENST00000544268 TGFBR3Q03167 851 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 SNRNP40Q96DI7 357 aaKnown RBP12.6□□□□□ -0.39
CHFR-223ENST00000544268 TECTBQ96PL2 329 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 MIEN1Q9BRT3 115 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 RNF24Q9Y225 148 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 SIRPB1O00241 398 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 CNOT4O95628 575 aaKnown RBP12.59□□□□□ -0.39
CHFR-223ENST00000544268 CGAP01215 116 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 CD55P08174 381 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 PLP2Q04941 152 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 C20orf144Q9BQM9 153 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 ERRFI1Q9UJM3 462 aaPredicted RBP12.59□□□□□ -0.39
CHFR-223ENST00000544268 ZFP30Q9Y2G7 519 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 ATP23Q9Y6H3 246 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 TUSC2O75896 110 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 BCL2P10415 239 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 MMP9P14780 707 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 IDH3GP51553 393 aaPredicted RBP12.59□□□□□ -0.39
CHFR-223ENST00000544268 ZNF154Q13106 437 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 OR5I1Q13606 314 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 GABRA6Q16445 453 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 WDR25Q64LD2 544 aaPredicted RBP12.59□□□□□ -0.39
CHFR-223ENST00000544268 Q6ZRM9 215 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
CHFR-223ENST00000544268 OR51G1Q8NGK1 321 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 TMEM37Q8WXS4 190 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 NANOS1Q8WY41 292 aaKnown RBP12.59□□□□□ -0.39
CHFR-223ENST00000544268 TMEM56Q96MV1 263 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 P2RX4Q99571 388 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 PROCRQ9UNN8 238 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 TMEM56-RWDD3S4R434 201 aa12.59□□□□□ -0.39
CHFR-223ENST00000544268 ATRXP46100 2492 aa12.58□□□□□ -0.39
CHFR-223ENST00000544268 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
CHFR-223ENST00000544268 CDS2O95674 445 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 PSG2P11465 335 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 COX5AP20674 150 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 GZMHP20718 246 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 NMSQ5H8A3 153 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 ACTL10Q5JWF8 245 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 CXorf67Q86X51 503 aaPredicted RBP12.58□□□□□ -0.4
CHFR-223ENST00000544268 OR5A2Q8NGI9 324 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 OR5C1Q8NGR4 320 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 OR2J1Q9GZK6 312 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 TAAR3PQ9P1P4 343 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 ANKRD30BLA7E2S9 258 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 CHST1O43916 411 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 DYNLT3P51808 116 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 C16orf82Q7Z2V1 217 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 CENPVQ7Z7K6 275 aaPredicted RBP12.58□□□□□ -0.4
CHFR-223ENST00000544268 FAM58AQ8N1B3 248 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 TMEM252Q8N6L7 170 aa12.58□□□□□ -0.4
CHFR-223ENST00000544268 K7EP13 123 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 IGLV2-14P01704 120 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 PPBPP02775 128 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 TUBG1P23258 451 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 UBE2NP61088 152 aaKnown RBP12.57□□□□□ -0.4
CHFR-223ENST00000544268 TMEM241Q24JQ0 296 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 ZNF295-AS1Q8N0V1 137 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 OR5T1Q8NG75 326 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 OR5B12Q96R08 314 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 TBX15Q96SF7 602 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 LYRM2Q9NU23 88 aaPredicted RBP12.57□□□□□ -0.4
CHFR-223ENST00000544268 ZNF705FA8MVS1 300 aaPredicted RBP12.57□□□□□ -0.4
CHFR-223ENST00000544268 ZNF705DP0CH99 300 aaPredicted RBP12.57□□□□□ -0.4
CHFR-223ENST00000544268 ZNF705BP0CI00 300 aaPredicted RBP12.57□□□□□ -0.4
CHFR-223ENST00000544268 S100A7P31151 101 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 TIMP3P35625 211 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 GNB2P62879 340 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 COL5A1-AS1Q5SY13 56 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 GFRALQ6UXV0 394 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 DOLPP1Q86YN1 238 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 ZCCHC14Q8WYQ9 949 aaKnown RBP12.57□□□□□ -0.4
CHFR-223ENST00000544268 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 PPP1R3CQ9UQK1 317 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 FUT9Q9Y231 359 aa12.57□□□□□ -0.4
CHFR-223ENST00000544268 ZFP92A6NM28 416 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 CDIPTO14735 213 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 GALR1P47211 349 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 PAX9P55771 341 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 TMEM267Q0VDI3 215 aaPredicted RBP12.56□□□□□ -0.4
CHFR-223ENST00000544268 MSL2Q9HCI7 577 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 NAT8Q9UHE5 227 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 PRRG2O14669 202 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 IGKV1-39P01597 117 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 IGKV1D-39P04432 117 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 UCP1P25874 307 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 TAS2R30P59541 319 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 GNG3P63215 75 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 LEMD1Q68G75 181 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms