RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TYMSP04818 313 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 LCN2P80188 198 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 GCSAMQ8N6F7 178 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 SPSB4Q96A44 273 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 MOSP00540 346 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 MFAP4P55083 255 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 TNFRSF9Q07011 255 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 MARS2Q96GW9 593 aaKnown RBP13.27□□□□□ -0.28
CHD4-210ENST00000544040 RAX2Q96IS3 184 aa13.27□□□□□ -0.28
CHD4-210ENST00000544040 FOXS1O43638 330 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 GLIPR1P48060 266 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 FAM169BQ8N8A8 192 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 IDI2-AS1Q9NZ38 188 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 SELENOTP62341 195 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 BEND2Q8NDZ0 799 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 AQP3Q92482 292 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 C21orf140B9A014 251 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 RRHO14718 337 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 MC5RP33032 325 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 FAM27BQ5VT28 67 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 COPS9Q8WXC6 57 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.29
CHD4-210ENST00000544040 RPS20P60866 119 aaKnown RBP13.26□□□□□ -0.29
CHD4-210ENST00000544040 ZNF818PQ6ZRF7 136 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 SPAG8Q99932 426 aaPredicted RBP13.26□□□□□ -0.29
CHD4-210ENST00000544040 C5orf66Q9H5L9 145 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 TOPAZ1Q8N9V7 1692 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 KCNE5Q9UJ90 142 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 FSTP19883 344 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 CENPWQ5EE01 88 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 REC114Q7Z4M0 266 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 ECM29Q5VYK3 1845 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 A0A1B0GWB2 263 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 AQP10Q96PS8 301 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 IMMP2LQ96T52 175 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 S4R3C0 116 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 DPRXA6NFQ7 191 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 MARCH11A6NNE9 402 aa13.26□□□□□ -0.29
CHD4-210ENST00000544040 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
CHD4-210ENST00000544040 ATP5G2Q06055 141 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 MBD3L1Q8WWY6 194 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 SLC25A38Q96DW6 304 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 ZNF414Q96IQ9 312 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 SLX4Q8IY92 1834 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 IFITM2Q01629 132 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 PMCHL2Q9BQD1 86 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 DLL3Q9NYJ7 618 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 ZP4Q12836 540 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 TRBV5-5A0A0J9YX44 114 aa13.25□□□□□ -0.29
CHD4-210ENST00000544040 ZNF324BQ6AW86 544 aaPredicted RBP13.24□□□□□ -0.29
CHD4-210ENST00000544040 OR51G1Q8NGK1 321 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 WFDC6Q9BQY6 131 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 IGHV3-49A0A0A0MS15 119 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 ERGP11308 486 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 KIF13AQ9H1H9 1805 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 A0A1B0GV72 72 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 SLC17A3O00476 420 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 DXOO77932 396 aaKnown RBP13.24□□□□□ -0.29
CHD4-210ENST00000544040 CA1P00915 261 aaPredicted RBP13.24□□□□□ -0.29
CHD4-210ENST00000544040 DANCRP0C864 163 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 LINC00305Q7Z4B0 112 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 NABP2Q9BQ15 211 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 C17orf51A8MQB3 221 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 ZFP36L2P47974 494 aaKnown RBP13.24□□□□□ -0.29
CHD4-210ENST00000544040 TMEM183AQ8IXX5 376 aa13.24□□□□□ -0.29
CHD4-210ENST00000544040 HBBP68871 147 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
CHD4-210ENST00000544040 NPIPB8E9PQR5 432 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 NPIPB9F8W1W9 429 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 NPIPB7O75200 414 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 NPIPB3Q92617 1050 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 TXNDC17Q9BRA2 123 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 NRAPQ86VF7 1730 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 NDUFA3O95167 84 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 OR11H1Q8NG94 326 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 OR11H2Q8NH07 326 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 NRXN3Q9Y4C0 1643 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 TJP1Q07157 1748 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 SCN3AQ9NY46 2000 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 GCHFRP30047 84 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 HSPE1P61604 102 aaKnown RBP13.23□□□□□ -0.29
CHD4-210ENST00000544040 DIRC2Q96SL1 478 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 RPS11P62280 158 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHD4-210ENST00000544040 C10orf128Q5T292 105 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 MTURNQ8N3F0 131 aa13.23□□□□□ -0.29
CHD4-210ENST00000544040 M0R381 172 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 LIMS1P48059 325 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 APOMO95445 188 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 FAM106AQ4KMX7 169 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 LAMTOR1Q6IAA8 161 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 FAM159AQ6UWV7 190 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 JKAMPQ9P055 326 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 ODAMA1E959 279 aa13.22□□□□□ -0.29
CHD4-210ENST00000544040 APOHP02749 345 aaPredicted RBP13.22□□□□□ -0.29
CHD4-210ENST00000544040 TMEM187Q14656 261 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms