RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 OR4F4Q96R69 305 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 GPHA2Q96T91 129 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 CCL28Q9NRJ3 127 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 TAS2R8Q9NYW2 309 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 SHOXO15266 292 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 CA2P00918 260 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 IGHG4P01861 327 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 HLA-DMAP28067 261 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 RCVRNP35243 200 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 HRH1P35367 487 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 LGALS7P47929 136 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 RPL23AP62750 156 aaKnown RBP17.08■□□□□ 0.32
OTUB1-212ENST00000543988 FOXE3Q13461 319 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 DYRK1AQ13627 763 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 ZNF660Q6AZW8 331 aaPredicted RBP17.08■□□□□ 0.32
OTUB1-212ENST00000543988 TEX38Q6PEX7 206 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 TMEM17Q86X19 198 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 HSD17B10Q99714 261 aaKnown RBP17.08■□□□□ 0.32
OTUB1-212ENST00000543988 SLC5A7Q9GZV3 580 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 NOTCH1P46531 2555 aa17.08■□□□□ 0.32
OTUB1-212ENST00000543988 TRAV41A0A0B4J266 112 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 SRRM4A7MD48 611 aaKnown RBP17.07■□□□□ 0.32
OTUB1-212ENST00000543988 SULT1C2O00338 296 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 FCGR3BO75015 233 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 CRYGBP07316 175 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 HERV-K104P61576 105 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 MSMO1Q15800 293 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 ECSCRQ19T08 205 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 C18orf65Q6ZTR6 163 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 TCTEX1D2Q8WW35 142 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 ABHD1Q96SE0 405 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 A3GALT2U3KPV4 340 aa17.07■□□□□ 0.32
OTUB1-212ENST00000543988 TNFSF12O43508 249 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 RPLP1P05386 114 aaKnown RBP17.06■□□□□ 0.32
OTUB1-212ENST00000543988 PF4V1P10720 104 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 EGR2P11161 476 aaPredicted RBP17.06■□□□□ 0.32
OTUB1-212ENST00000543988 C19orf54Q5BKX5 351 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 DHRS11Q6UWP2 260 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 RNF152Q8N8N0 203 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 OR52I2Q8NH67 350 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 ABHD5Q8WTS1 349 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 ZNF2Q9BSG1 426 aaPredicted RBP17.06■□□□□ 0.32
OTUB1-212ENST00000543988 SLIRPQ9GZT3 109 aaKnown RBP17.06■□□□□ 0.32
OTUB1-212ENST00000543988 RBM38Q9H0Z9 239 aaKnown RBP17.06■□□□□ 0.32
OTUB1-212ENST00000543988 PRELID3BQ9Y3B1 194 aa17.06■□□□□ 0.32
OTUB1-212ENST00000543988 TPPPO94811 219 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 ELANEP08246 267 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 PPIFP30405 207 aaKnown RBP17.05■□□□□ 0.32
OTUB1-212ENST00000543988 CRIP2P52943 208 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-212ENST00000543988 SSBP2P81877 361 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-212ENST00000543988 PJVKQ0ZLH3 352 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 CXorf66Q5JRM2 361 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-212ENST00000543988 ZNF562Q6V9R5 426 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 ZNF66Q6ZN08 573 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 PPP1R27Q86WC6 154 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 MFSD4AQ8N468 514 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 OSR1Q8TAX0 266 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-212ENST00000543988 MOB3AQ96BX8 217 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 FAM103A1Q9BTL3 118 aaKnown RBP17.05■□□□□ 0.32
OTUB1-212ENST00000543988 FXYD6Q9H0Q3 95 aa17.05■□□□□ 0.32
OTUB1-212ENST00000543988 CCDC160A6NGH7 325 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 ARPC1BO15143 372 aaKnown RBP17.04■□□□□ 0.32
OTUB1-212ENST00000543988 PSMB8P28062 276 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 BRWD1-AS2P59051 145 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 UBE2KP61086 200 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 ZNF818PQ6ZRF7 136 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 MINDY2Q8NBR6 621 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 OR4S2Q8NH73 311 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 GRPEL2Q8TAA5 225 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 ARPC1AQ92747 370 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 C6orf62Q9GZU0 229 aaPredicted RBP17.04■□□□□ 0.32
OTUB1-212ENST00000543988 ZFP57Q9NU63 452 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 KLK11Q9UBX7 282 aa17.04■□□□□ 0.32
OTUB1-212ENST00000543988 NUDT19A8MXV4 375 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 GNB1P62873 340 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 FXYD3Q14802 87 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 MRGPRG-AS1Q2M3A8 158 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 VMA21Q3ZAQ7 101 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 IDO2Q6ZQW0 420 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 ZBTB34Q8NCN2 500 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 KLHL30-AS1Q8NEE0 82 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 DCUN1D5Q9BTE7 237 aa17.03■□□□□ 0.32
OTUB1-212ENST00000543988 M0QYG6 137 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 SOX15O60248 233 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 IGLV1-40P01703 118 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 SAA1P0DJI8 122 aaPredicted RBP17.02■□□□□ 0.32
OTUB1-212ENST00000543988 DGCR2P98153 550 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 ETV3LQ6ZN32 361 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 C8orf86Q6ZUL3 223 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 ZNF695Q8IW36 515 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 OR6F1Q8NGZ6 308 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 MYOZ3Q8TDC0 251 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 C15orf40Q8WUR7 153 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 KLK15Q9H2R5 256 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 MTFP1Q9UDX5 166 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 FOXA2Q9Y261 457 aaPredicted RBP17.02■□□□□ 0.32
OTUB1-212ENST00000543988 NUBP2Q9Y5Y2 271 aa17.02■□□□□ 0.32
OTUB1-212ENST00000543988 PF4P02776 101 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 GNRHRP30968 328 aa17.01■□□□□ 0.31
OTUB1-212ENST00000543988 KIR2DS2P43631 304 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms