RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 OR5AN1Q8NGI8 311 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 OR4C13Q8NGP0 309 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 OR5R1Q8NH85 324 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
DDB1-223ENST00000543658 CASTOR1Q8WTX7 329 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 TMEM230Q96A57 120 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 FLYWCH2Q96CP2 140 aaKnown RBP9.58□□□□□ -0.88
DDB1-223ENST00000543658 HARBI1Q96MB7 349 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 AIFM2Q9BRQ8 373 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 FAM212BQ9NTI7 297 aaPredicted RBP9.58□□□□□ -0.88
DDB1-223ENST00000543658 TLN2Q9Y4G6 2542 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 VGLL3A8MV65 326 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 RBFOX2O43251 390 aaKnown RBP eCLIP9.57□□□□□ -0.887e-7■■□□□ 13.4
DDB1-223ENST00000543658 SFT2D2O95562 160 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 HPRT1P00492 218 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 HRASP01112 189 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 RPA2P15927 270 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 SPNP16150 400 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 DYNLT3P51808 116 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 OXA1LQ15070 435 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 ZNF695Q8IW36 515 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 OSR1Q8TAX0 266 aaPredicted RBP9.57□□□□□ -0.88
DDB1-223ENST00000543658 SSMEM1Q8WWF3 244 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 DDB2Q92466 427 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 CFHR4Q92496 578 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 GALNT14Q96FL9 552 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 TP53RKQ96S44 253 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 MARVELD1Q9BSK0 173 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 ALX4Q9H161 411 aaPredicted RBP9.57□□□□□ -0.88
DDB1-223ENST00000543658 COMMD9Q9P000 198 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 KIAA1456Q9P272 454 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 SOX21Q9Y651 276 aaPredicted RBP9.57□□□□□ -0.88
DDB1-223ENST00000543658 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
DDB1-223ENST00000543658 CELSR1Q9NYQ6 3014 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 F8P00451 2351 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 C9orf170A2RU37 121 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 CREBL2O60519 120 aaPredicted RBP9.56□□□□□ -0.88
DDB1-223ENST00000543658 IL5P05113 134 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 CD24P25063 80 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 LPAR6P43657 344 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 MECP2P51608 486 aaKnown RBP9.56□□□□□ -0.88
DDB1-223ENST00000543658 AKR1C2P52895 323 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 LINC00205P59089 165 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 DHRS2Q13268 280 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 HABP2Q14520 560 aaPredicted RBP9.56□□□□□ -0.88
DDB1-223ENST00000543658 PLGLAQ15195 96 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 MMDQ15546 238 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 SP6Q3SY56 376 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 VMA21Q3ZAQ7 101 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 Q6YL49 198 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 THNSL2Q86YJ6 484 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 LGI3Q8N145 548 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 SIGLECL1Q8N7X8 197 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 DMBX1Q8NFW5 382 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 CHPT1Q8WUD6 406 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 AJUBAQ96IF1 538 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 JMJD8Q96S16 334 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 TSNAXQ99598 290 aaKnown RBP9.56□□□□□ -0.88
DDB1-223ENST00000543658 PHB2Q99623 299 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 SEC22CQ9BRL7 303 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 TMEM222Q9H0R3 208 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 C1RLQ9NZP8 487 aa9.56□□□□□ -0.88
DDB1-223ENST00000543658 NCBP2LA6PVI3 153 aaKnown RBP9.55□□□□□ -0.88
DDB1-223ENST00000543658 RAMP3O60896 148 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 S1PR2O95136 353 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 FAM157CP0CG43 387 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 VSIG10L2P0DP72 767 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 NQO2P16083 231 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 UCP1P25874 307 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 IER3P46695 156 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 LGALS7P47929 136 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 HNF4GQ14541 408 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 TMEM187Q14656 261 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 LY6EQ16553 131 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 TATDN3Q17R31 274 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 TMEM177Q53S58 311 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 TMEM268Q5VZI3 342 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 OR52B4Q8NGK2 314 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 VSTM2AQ8TAG5 236 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 ZNF431Q8TF32 576 aaPredicted RBP9.55□□□□□ -0.88
DDB1-223ENST00000543658 RBPMSQ93062 196 aaKnown RBP9.55□□□□□ -0.88
DDB1-223ENST00000543658 R3HDM4Q96D70 268 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 EAF1Q96JC9 268 aaPredicted RBP9.55□□□□□ -0.88
DDB1-223ENST00000543658 RNF5Q99942 180 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 PLEKHA2Q9HB19 425 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 RAB18Q9NP72 206 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 TNFRSF19Q9NS68 423 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 TCF19Q9Y242 345 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 POMT1Q9Y6A1 747 aa9.55□□□□□ -0.88
DDB1-223ENST00000543658 SONP18583 2426 aaKnown RBP9.54□□□□□ -0.88
DDB1-223ENST00000543658 FAM90A9PA6NNJ1 464 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 NBR2O15453 112 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 HOXA3O43365 443 aaPredicted RBP9.54□□□□□ -0.88
DDB1-223ENST00000543658 SSNA1O43805 119 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 CRLF1O75462 422 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 SPDEFO95238 335 aa9.54□□□□□ -0.88
DDB1-223ENST00000543658 DUS4LO95620 317 aaKnown RBP9.54□□□□□ -0.88
DDB1-223ENST00000543658 IGHV4-59P01825 116 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms