RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 Q9UFV3 132 aa11.33□□□□□ -0.6
SLC3A2-220ENST00000542922 JPT1Q9UK76 154 aa11.33□□□□□ -0.6
SLC3A2-220ENST00000542922 TRAV3A0A0B4J244 114 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 CEBPZOSA8MTT3 80 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 FOLR2P14207 255 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 GZMHP20718 246 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 AKR1D1P51857 326 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 TNFAIP6P98066 277 aaPredicted RBP11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 C17orf58Q2M2W7 97 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 ZNF429Q86V71 674 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 DOLPP1Q86YN1 238 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 CISD2Q8N5K1 135 aaKnown RBP11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 KLF2Q9Y5W3 355 aaPredicted RBP11.32□□□□□ -0.6
SLC3A2-220ENST00000542922 F2RL2O00254 374 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 OR8U8P0C7N1 319 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 EIF2S3LQ2VIR3 472 aaKnown RBP11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 CR1LQ2VPA4 569 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 PRR30Q53SZ7 412 aaPredicted RBP11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 ZCCHC24Q8N2G6 241 aaKnown RBP11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 RPP25LQ8N5L8 163 aaKnown RBP11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 EDARADDQ8WWZ3 215 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 MAP1LC3B2A6NCE7 125 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 YPEL1O60688 119 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 CGB3P0DN86 165 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 CGB7P0DN87 165 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 BCL2P10415 239 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 FGF7P21781 194 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 PTAFRP25105 342 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 RAB11AP62491 216 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 KHDC3LQ587J8 217 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 FAM90A2PQ658T7 463 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 Q8NA96 180 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 YPEL4Q96NS1 127 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 YPEL2Q96QA6 119 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 CCL13Q99616 98 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 PARD6GQ9BYG4 376 aaPredicted RBP11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 MAP1LC3BQ9GZQ8 125 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 SLC25A22Q9H936 323 aa11.31□□□□□ -0.6
SLC3A2-220ENST00000542922 GYPAP02724 150 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 MT-ND4LP03901 98 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 RAB5AP20339 215 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 DLK1P80370 383 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 SERF2P84101 59 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 STUMQ69YW2 141 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 ZNF343Q6P1L6 599 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 ASCL5Q7RTU5 278 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 WFDC8Q8IUA0 241 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 LINC00518Q8N0U6 118 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 PPP1R35Q8TAP8 253 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 GAFA1Q96PS6 74 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 TMPRSS5Q9H3S3 457 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 TUBA4BQ9H853 241 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 ZNRD1Q9P1U0 126 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 RNF7Q9UBF6 113 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 MKRN2OSH3BPM6 223 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 MMP23AO75900 390 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 OR2C1O95371 312 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 TAGLN2P37802 199 aaKnown RBP11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 GATA4P43694 442 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 KRTCAP3Q53RY4 240 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 PRAMEF5Q5TYX0 476 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 TCTEX1D1Q8N7M0 179 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 OR10P1Q8NGE3 313 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 FAM222BQ8WU58 562 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 OR6C3Q9NZP0 311 aa11.3□□□□□ -0.6
SLC3A2-220ENST00000542922 KALRNO60229 2985 aa11.29□□□□□ -0.6
SLC3A2-220ENST00000542922 CCL8P80075 99 aa11.29□□□□□ -0.6
SLC3A2-220ENST00000542922 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
SLC3A2-220ENST00000542922 CISD1Q9NZ45 108 aaKnown RBP11.29□□□□□ -0.6
SLC3A2-220ENST00000542922 SAA2-SAA4A0A096LPE2 208 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 IFNA17P01571 189 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 SAA2P0DJI9 122 aaPredicted RBP11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 SNRPEP62304 92 aaKnown RBP11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 ADAM5Q6NVV9 412 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 LAMP3Q9UQV4 416 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 DPRXA6NFQ7 191 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 C1orf196B1AJZ1 125 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 HPRT1P00492 218 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 THBDP07204 575 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 AGAP20933 346 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 GNG10P50151 68 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 RAB5BP61020 215 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 FFAR4Q5NUL3 377 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 ZNF561Q8N587 486 aa11.28□□□□□ -0.6
SLC3A2-220ENST00000542922 Q8N7P7 452 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms