RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 IL3RAP26951 378 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 CA7P43166 264 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 DUSP3P51452 185 aaPredicted RBP4.86□□□□□ -1.63
XRCC4-206ENST00000542685 TCL1AP56279 114 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 FXYD6P3P58550 94 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 MRPS34P82930 218 aaKnown RBP4.86□□□□□ -1.63
XRCC4-206ENST00000542685 SMAGPQ0VAQ4 97 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 HSPB3Q12988 150 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 GNMTQ14749 295 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 CD226Q15762 336 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 CCSMST1Q4G0I0 132 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 CST9LP1Q5W188 147 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 TRAPPC6BQ86SZ2 158 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 BOD1L2Q8IYS8 172 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF676Q8N7Q3 588 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 ADAD2Q8NCV1 583 aaKnown RBP4.86□□□□□ -1.63
XRCC4-206ENST00000542685 OR5AR1Q8NGP9 310 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 OR13G1Q8NGZ3 307 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 RAB8BQ92930 207 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 KCNS1Q96KK3 526 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 PDCD1LG2Q9BQ51 273 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 CHRDL1Q9BU40 450 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 MS4A6AQ9H2W1 248 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 C5orf66Q9H5L9 145 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 SIGLEC8Q9NYZ4 499 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 EHFQ9NZC4 300 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 ERRFI1Q9UJM3 462 aaPredicted RBP4.86□□□□□ -1.63
XRCC4-206ENST00000542685 PSG8Q9UQ74 426 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 EP400Q96L91 3159 aa4.86□□□□□ -1.63
XRCC4-206ENST00000542685 IGLV5-37A0A075B6J1 123 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 LRP5LA4QPB2 252 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 HELTA6NFD8 242 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 TMEM202A6NGA9 273 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 IGLON5A6NGN9 336 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 OR2T8A6NH00 312 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 H0YJW9 148 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 P2RY10O00398 339 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 TIMM23O14925 209 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 TNFP01375 233 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 GRPRP30550 384 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 HRH1P35367 487 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 CDKN1AP38936 164 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF136P52737 540 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 CLDN6P56747 220 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 RPL23P62829 140 aaKnown RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 RPL32P62910 135 aaKnown RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 SUPT4H1P63272 117 aaKnown RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ARF1P84077 181 aaKnown RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 SERF2P84101 59 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ADORA2A-AS1P86434 159 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ELAVL3Q14576 367 aaKnown RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ZIC1Q15915 447 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 GABRA6Q16445 453 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF74Q16587 644 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 PRICKLE4Q2TBC4 344 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 HLA-DRB5Q30154 266 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ANKRD55Q3KP44 614 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 TMEM97Q5BJF2 176 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 GCSAMLQ5JQS6 135 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 PLXDC2Q6UX71 529 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 RFLNAQ6ZTI6 216 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 HSD11B1LQ7Z5J1 315 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 LRP11Q86VZ4 500 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 CDC20BQ86Y33 519 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 SAXO1Q8IYX7 474 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 TMEM256Q8N2U0 113 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 TTC9CQ8N5M4 171 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 RFLNBQ8N5W9 214 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 OR10V1Q8NGI7 309 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 OR5H2Q8NGV7 314 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 OR2AJ1Q8NGZ0 328 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 SGMS2Q8NHU3 365 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 MARCH1Q8TCQ1 289 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 OR5P3Q8WZ94 311 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 WBP2Q969T9 261 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 BORCS7Q96B45 105 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 GPX7Q96SL4 187 aaPredicted RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 MCHR1Q99705 422 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 SPIN2AQ99865 258 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 SPIN2BQ9BPZ2 258 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 PRSS27Q9BQR3 290 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 TXNDC17Q9BRA2 123 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 PLEKHF2Q9H8W4 249 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 NRN1Q9NPD7 142 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 IL36GQ9NZH8 169 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 CES1P1Q9UKY3 287 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 CYSLTR1Q9Y271 337 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 VDAC3Q9Y277 283 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 ZNF443Q9Y2A4 671 aaPredicted RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 PTRH2Q9Y3E5 179 aaKnown RBP4.85□□□□□ -1.63
XRCC4-206ENST00000542685 PPIAL4AQ9Y536 164 aa4.85□□□□□ -1.63
XRCC4-206ENST00000542685 LTBP2Q14767 1821 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 LOC102725191A0A1B0GVB3 256 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 ODAMA1E959 279 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 MEIS3P1A6NDR6 274 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.84□□□□□ -1.63
XRCC4-206ENST00000542685 CDC42EP2O14613 210 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 MLNRO43193 412 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 SERF1AO75920 110 aa4.84□□□□□ -1.63
XRCC4-206ENST00000542685 LYPD3O95274 346 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms