RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 WIPF3A6NGB9 483 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 KRBOX1C9JBD0 128 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 RNASEK-C17orf49H0YIS7 233 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 ERVH48-1M5A8F1 160 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 CDS2O95674 445 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 HBE1P02100 147 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 COX6B1P14854 86 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 ADIPOQQ15848 244 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 Q56UQ5 140 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 SPRNQ5BIV9 151 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 LYPD2Q6UXB3 125 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 UNKLQ9H9P5 680 aaKnown RBP8.49□□□□□ -1.05
TOP3A-208ENST00000542570 ARHGAP32A7KAX9 2087 aa8.49□□□□□ -1.05
TOP3A-208ENST00000542570 IGHV3OR16-13A0A075B7E8 117 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 IGHV3-74A0A0B4J1X5 117 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 H0YIZ8 118 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 IGKV3-15P01624 115 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 LY6G6FQ5SQ64 297 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 TRAT1Q6PIZ9 186 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 CLEC2AQ6UVW9 174 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 WDR86Q86TI4 376 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 LINC00596Q86U02 117 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 OR10G4Q8NGN3 311 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 OR10G9Q8NGN4 311 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 OR10G7Q8NGN6 311 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 TMEM140Q9NV12 185 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 IDI2-AS1Q9NZ38 188 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 CD55P08174 381 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 COL8A2P25067 703 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 ZNF645Q8N7E2 425 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 SAT2Q96F10 170 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-208ENST00000542570 TMEM56Q96MV1 263 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 ACTR3CQ9C0K3 210 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-208ENST00000542570 MMP24Q9Y5R2 645 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 POMT1Q9Y6A1 747 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 SELENOKQ9Y6D0 94 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
TOP3A-208ENST00000542570 MAP1LC3B2A6NCE7 125 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A10PA6NDY2 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A18PA6NE21 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A16PA6NEW6 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A20PA6NIJ5 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A8PA6NJQ4 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A7PA6NKC0 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A22PA8MWA6 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A12PA8MX19 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A5PA8MXJ8 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A23PA8MXZ1 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A15PP0C7V4 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A13PP0C7W8 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A14PP0C7W9 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM90A24PP0C7X0 464 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM78BQ5VT40 261 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 ISOC2Q96AB3 205 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 SMIM7Q9BQ49 75 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 MAP1LC3BQ9GZQ8 125 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 RBKSQ9H477 322 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 HEXA-AS1Q9H8Q6 139 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 OR51B2Q9Y5P1 312 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 TNRC6AQ8NDV7 1962 aaKnown RBP8.48□□□□□ -1.05
TOP3A-208ENST00000542570 ZNF320A2RRD8 509 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 F2RL2O00254 374 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 COX7A2P2O60397 106 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 COL8A1P27658 744 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 SUPT4H1P63272 117 aaKnown RBP8.48□□□□□ -1.05
TOP3A-208ENST00000542570 SPNS3Q6ZMD2 512 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 FAM216AQ8WUB2 273 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 SPSB4Q96A44 273 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 MS4A10Q96PG2 267 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 OR4C12Q96R67 309 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 COA4Q9NYJ1 87 aa8.48□□□□□ -1.05
TOP3A-208ENST00000542570 DOPEY1Q5JWR5 2465 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 BTBD17A6NE02 478 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 E7EQL1 145 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 H0Y980 276 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 MYOD1P15172 320 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 NPY1RP25929 384 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 LYZP61626 148 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 SLC35E4Q6ICL7 350 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 KIR3DL3Q8N743 410 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 OR10Z1Q8NGY1 313 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 LHFPL5Q8TAF8 219 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 NTNG2Q96CW9 530 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 QTRT1Q9BXR0 403 aaKnown RBP8.47□□□□□ -1.05
TOP3A-208ENST00000542570 LOC105371242A0A075B767 164 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 HKR1P10072 659 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 TMEM42Q69YG0 159 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 BSCL2Q96G97 398 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-208ENST00000542570 SGK494Q96LW2 274 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 LIME1Q9H400 295 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 SLC2A8Q9NY64 477 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 TRAV14DV4A0A0A6YYC5 116 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 DEDDO75618 318 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 OR2A4O95047 310 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 NMBP08949 121 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 OR10J4P0C629 311 aa8.47□□□□□ -1.05
TOP3A-208ENST00000542570 ACOT6Q3I5F7 207 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms