RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MXRA5Q9NR99 2828 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 C3orf85A0A1B0GTC6 90 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 CRYM-AS1A6NIL9 109 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 UBE2MP61081 183 aaKnown RBP18.53■□□□□ 0.56
HOMER3-205ENST00000542541 RGS21Q2M5E4 152 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 SLC25A42Q86VD7 318 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 EAF1Q96JC9 268 aaPredicted RBP18.53■□□□□ 0.56
HOMER3-205ENST00000542541 NAA60Q9H7X0 242 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 FLVCR2Q9UPI3 526 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 TCF19Q9Y242 345 aa18.53■□□□□ 0.56
HOMER3-205ENST00000542541 A0A0A6YYJ9 748 aa18.52■□□□□ 0.56
HOMER3-205ENST00000542541 H2AFB2P0C5Z0 115 aa18.52■□□□□ 0.56
HOMER3-205ENST00000542541 TMEM11P17152 192 aa18.52■□□□□ 0.56
HOMER3-205ENST00000542541 OR2B11Q5JQS5 317 aa18.52■□□□□ 0.56
HOMER3-205ENST00000542541 ALX4Q9H161 411 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-205ENST00000542541 TRAV6A0A075B6T7 132 aa18.52■□□□□ 0.55
HOMER3-205ENST00000542541 H0Y980 276 aa18.52■□□□□ 0.55
HOMER3-205ENST00000542541 IGKV1-16P04430 117 aa18.52■□□□□ 0.55
HOMER3-205ENST00000542541 HNF4GQ14541 408 aa18.52■□□□□ 0.55
HOMER3-205ENST00000542541 ZFAND2BQ8WV99 257 aa18.52■□□□□ 0.55
HOMER3-205ENST00000542541 TMEM230Q96A57 120 aa18.52■□□□□ 0.55
HOMER3-205ENST00000542541 VPREB3Q9UKI3 123 aa18.52■□□□□ 0.55
HOMER3-205ENST00000542541 CRYZL1O95825 349 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 SERPINE2P07093 398 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 ANXA3P12429 323 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 HILS1P60008 231 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 RPS16P62249 146 aaKnown RBP18.51■□□□□ 0.55
HOMER3-205ENST00000542541 TMEM177Q53S58 311 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 LIAT1Q6ZQX7 453 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 OR8H1Q8NGG4 311 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 OSR1Q8TAX0 266 aaPredicted RBP18.51■□□□□ 0.55
HOMER3-205ENST00000542541 GALNT14Q96FL9 552 aa18.51■□□□□ 0.55
HOMER3-205ENST00000542541 A6NDX4 124 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 CLDN34H7C241 214 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 HPRT1P00492 218 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 LGALS7P47929 136 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 BRWD1-AS2P59051 145 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 DHODHQ02127 395 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 LY6EQ16553 131 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 AIFM2Q9BRQ8 373 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 C1RLQ9NZP8 487 aa18.5■□□□□ 0.55
HOMER3-205ENST00000542541 NIPBLQ6KC79 2804 aaeCLIP18.5■□□□□ 0.55
HOMER3-205ENST00000542541 SHOXO15266 292 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 RAMP3O60896 148 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 PEX14O75381 377 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 SLC9A3R2Q15599 337 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 C16orf82Q7Z2V1 217 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 TP53RKQ96S44 253 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 TSNAXQ99598 290 aaKnown RBP18.49■□□□□ 0.55
HOMER3-205ENST00000542541 PLEKHA2Q9HB19 425 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 TNFRSF19Q9NS68 423 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 DNAJC9-AS1A6NH13 148 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 TCF21O43680 179 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 OR2F2O95006 317 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 HRASP01112 189 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 IFNA2P01563 188 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 RPA2P15927 270 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 ANXA7P20073 488 aaKnown RBP18.49■□□□□ 0.55
HOMER3-205ENST00000542541 VAMP1P23763 118 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 LPAR6P43657 344 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 MECP2P51608 486 aaKnown RBP18.49■□□□□ 0.55
HOMER3-205ENST00000542541 RAG2P55895 527 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 Q8N6K4 173 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 HARBI1Q96MB7 349 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 RBM14Q96PK6 669 aaKnown RBP18.49■□□□□ 0.55
HOMER3-205ENST00000542541 TMEM222Q9H0R3 208 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 RAB18Q9NP72 206 aa18.49■□□□□ 0.55
HOMER3-205ENST00000542541 OR5AC1P0C628 307 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 OR4E1P0C645 316 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 SP6Q3SY56 376 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 C4orf46Q504U0 113 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 MARVELD1Q9BSK0 173 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 COMMD9Q9P000 198 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 ZFHX3Q15911 3703 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 CUBNO60494 3623 aa18.48■□□□□ 0.55
HOMER3-205ENST00000542541 PIGBOS1A0A0B4J2F0 54 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 INMT-MINDY4F8WBC2 141 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 UCP1P25874 307 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 SUPT4H1P63272 117 aaKnown RBP18.47■□□□□ 0.55
HOMER3-205ENST00000542541 PPP1R1AQ13522 171 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 MMDQ15546 238 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 TRIM16LQ309B1 348 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 ZNF585BQ52M93 769 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 CCBE1Q6UXH8 406 aaPredicted RBP18.47■□□□□ 0.55
HOMER3-205ENST00000542541 TMEM219Q86XT9 240 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 GLYATL2Q8WU03 294 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 RITA1Q96K30 269 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 SLC25A33Q9BSK2 321 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 CHIAQ9BZP6 476 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 KIAA1456Q9P272 454 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 NF1P21359 2839 aa18.47■□□□□ 0.55
HOMER3-205ENST00000542541 NCBP2LA6PVI3 153 aaKnown RBP18.46■□□□□ 0.55
HOMER3-205ENST00000542541 SFT2D2O95562 160 aa18.46■□□□□ 0.55
HOMER3-205ENST00000542541 RAB25P57735 213 aa18.46■□□□□ 0.55
HOMER3-205ENST00000542541 SRPXP78539 464 aa18.46■□□□□ 0.55
HOMER3-205ENST00000542541 NPBQ8NG41 125 aa18.46■□□□□ 0.55
HOMER3-205ENST00000542541 BEX1Q9HBH7 125 aa18.46■□□□□ 0.55
HOMER3-205ENST00000542541 M0QZK8 103 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 NBR2O15453 112 aa18.45■□□□□ 0.54
HOMER3-205ENST00000542541 ATG12O94817 140 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms