RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 MFGE8Q08431 387 aaPredicted RBP9.42□□□□□ -0.9
CDH3-203ENST00000542274 PPP1R1AQ13522 171 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 WDR38Q5JTN6 314 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 GLIPR1L1Q6UWM5 242 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 FAM219AQ8IW50 185 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 ZNF611Q8N823 705 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 SLC25A40Q8TBP6 338 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 ZNF878C9JN71 531 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 NUDT3O95989 172 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 HBZP02008 142 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 B4GALT1P15291 398 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 SRP14P37108 136 aaKnown RBP9.42□□□□□ -0.9
CDH3-203ENST00000542274 CCL20P78556 96 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 PNRC1Q12796 327 aaPredicted RBP9.42□□□□□ -0.9
CDH3-203ENST00000542274 TIGITQ495A1 244 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 LCN15Q6UWW0 184 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 ZNF676Q8N7Q3 588 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 OR8B12Q8NGG6 310 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 OTOSQ8NHW6 89 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 RPS4Y2Q8TD47 263 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
CDH3-203ENST00000542274 TXNIPQ9H3M7 391 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 TNRC6AQ8NDV7 1962 aaKnown RBP9.42□□□□□ -0.9
CDH3-203ENST00000542274 TRAV38-1A0A0B4J264 116 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 K7EP34 96 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 NKX2-8O15522 239 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 STK17BO94768 372 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 HRASP01112 189 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 KRASP01116 189 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 GAPDHP04406 335 aaKnown RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 LYL1P12980 280 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 CCKBRP32239 447 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 EIF1AXP47813 144 aaKnown RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 GNG4P50150 75 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 GPM6AP51674 278 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 ERVK11-1P61568 191 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 CYCSP99999 105 aaKnown RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 STAC2Q6ZMT1 411 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 DNM1P46Q6ZS02 220 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 GPER1Q99527 375 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 RBM24Q9BX46 236 aaKnown RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 MOB1AQ9H8S9 216 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 ZDHHC11Q9H8X9 412 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 EIF1AYO14602 144 aaKnown RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 KLF7O75840 302 aaPredicted RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 IFNA1P01562 189 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 JMJD7P0C870 316 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 IGFBP2P18065 325 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 USF1P22415 310 aaPredicted RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 SFTPDP35247 375 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 ZNF787Q6DD87 383 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 ANKRD16Q6P6B7 361 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 FAM213BQ8TBF2 198 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 LIN37Q96GY3 246 aaPredicted RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 WNT10AQ9GZT5 417 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 CLCF1Q9UBD9 225 aa9.41□□□□□ -0.9
CDH3-203ENST00000542274 PHF3Q92576 2039 aaKnown RBP9.41□□□□□ -0.9
CDH3-203ENST00000542274 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 PSMB11A5LHX3 300 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 J3QR89 54 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 LMX1BO60663 402 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 OPRM1P35372 400 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 Q499Y3 187 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 DCAF12Q5T6F0 453 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 DTX1Q86Y01 620 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 KCNG3Q8TAE7 436 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 OR5B12Q96R08 314 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 TMEM189A5PLL7 270 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 ZFAND5O76080 213 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 SFT2D2O95562 160 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 CYB5AP00167 134 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 HSPB1P04792 205 aaKnown RBP9.4□□□□□ -0.9
CDH3-203ENST00000542274 SEC11BP0C7V7 166 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 PSG2P11465 335 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 SLC25A6P12236 298 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 APOBEC1P41238 236 aaKnown RBP9.4□□□□□ -0.9
CDH3-203ENST00000542274 ATP5G2Q06055 141 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 TCF15Q12870 199 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 ICAM4Q14773 271 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 PCOLCEQ15113 449 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 ACSM6Q6P461 480 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 OPN5Q6U736 354 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 PRSS33Q8NF86 280 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 OR51G1Q8NGK1 321 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 C4orf45Q96LM5 186 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 SAMD10Q9BYL1 202 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 DEFB126Q9BYW3 111 aa9.4□□□□□ -0.9
CDH3-203ENST00000542274 PNRC2Q9NPJ4 139 aaKnown RBP9.4□□□□□ -0.9
CDH3-203ENST00000542274 DOCK10Q96BY6 2186 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 F5H768 121 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 FOXH1O75593 365 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 WNT2P09544 360 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 TACSTD2P09758 323 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 SPINK8P0C7L1 97 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 FABP6P51161 128 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 MYBPHQ13203 477 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 MFAP5Q13361 173 aa9.4□□□□□ -0.91
CDH3-203ENST00000542274 MSMO1Q15800 293 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms