RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 IGHV1-2P23083 117 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 CD1BP29016 333 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 DDTP30046 118 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 GPR12P47775 334 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 PDLIM4P50479 330 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 RPL30P62888 115 aaKnown RBP5.68□□□□□ -1.5
NKRF-204ENST00000542113 RPL19P84098 196 aaKnown RBP5.68□□□□□ -1.5
NKRF-204ENST00000542113 OR4A16Q8NH70 328 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 MRGPRDQ8TDS7 321 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 SPRR3Q9UBC9 169 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 DOCK10Q96BY6 2186 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 COL27A1Q8IZC6 1860 aaPredicted RBP5.68□□□□□ -1.5
NKRF-204ENST00000542113 DIDO1Q9BTC0 2240 aaKnown RBP5.68□□□□□ -1.5
NKRF-204ENST00000542113 TRAV9-1A0A075B6T8 112 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 TRBV23-1A0A0A0MS06 115 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 MKRN2OSH3BPM6 223 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 PAGE4O60829 102 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 MDKP21741 143 aaPredicted RBP5.68□□□□□ -1.5
NKRF-204ENST00000542113 OPRK1P41145 380 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 SOX8P57073 446 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 COL10A1Q03692 680 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 AESQ08117 197 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 GAMTQ14353 236 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 HNF4GQ14541 408 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 Q3ZCU0 254 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 PDLIM3Q53GG5 364 aaPredicted RBP5.68□□□□□ -1.5
NKRF-204ENST00000542113 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 PRAMEF5Q5TYX0 476 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 PRAMEF6Q5VXH4 476 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 CLCF1Q9UBD9 225 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 PCSK5Q92824 1860 aa5.68□□□□□ -1.5
NKRF-204ENST00000542113 MDFIC2A0A1B0GVS7 189 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 IGKV3-15P01624 115 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 CELA3BP08861 270 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 CD82P27701 267 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 RAB31Q13636 194 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 SSX9Q7RTT3 188 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 COQ2Q96H96 371 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 ARRDC1-AS1Q9H2J1 176 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 OR6C3Q9NZP0 311 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 A0A087X0M5 115 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 A0A1B0GX30 115 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 ATXN7O15265 892 aaPredicted RBP5.67□□□□□ -1.5
NKRF-204ENST00000542113 IGHG3P01860 377 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 RAB7AP51149 207 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 ERVS71-1P61550 626 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 PMP22Q01453 160 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 TFF3Q07654 80 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 WDR82Q6UXN9 313 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 NECAP1Q8NC96 275 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 CORO2AQ92828 525 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 GNG12Q9UBI6 72 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 PSG11Q9UQ72 335 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 FREM1Q5H8C1 2179 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 ITGB1BP1O14713 200 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 MLNRO43193 412 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 LYZL6O75951 148 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 CXorf1O96002 111 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 AMBPP02760 352 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 GPX4P36969 197 aaPredicted RBP5.67□□□□□ -1.5
NKRF-204ENST00000542113 TMPRSS3P57727 454 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 IQCJQ1A5X6 159 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 PCGF1Q9BSM1 259 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 HEYLQ9NQ87 328 aaPredicted RBP5.67□□□□□ -1.5
NKRF-204ENST00000542113 ZNF407Q9C0G0 2248 aa5.67□□□□□ -1.5
NKRF-204ENST00000542113 DNAJC13O75165 2243 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 ARHGAP21Q5T5U3 1957 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 TRGV8A0A0C4DH27 118 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 C15orf62A8K5M9 175 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 MGST3O14880 152 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 YPEL1O60688 119 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 CD55P08174 381 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 RD3LP0DJH9 198 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 DUTP33316 252 aaKnown RBP5.66□□□□□ -1.5
NKRF-204ENST00000542113 MPV17P39210 176 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 CEBPDP49716 269 aaPredicted RBP5.66□□□□□ -1.5
NKRF-204ENST00000542113 CNN1P51911 297 aaKnown RBP5.66□□□□□ -1.5
NKRF-204ENST00000542113 FOXL1Q12952 345 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 LPAL2Q16609 132 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 MBNL2Q5VZF2 373 aaKnown RBP5.66□□□□□ -1.5
NKRF-204ENST00000542113 CST9LP1Q5W188 147 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 BTNL3Q6UXE8 466 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 FAM169BQ8N8A8 192 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 ZDHHC16Q969W1 377 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 SARAFQ96BY9 339 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 C5orf30Q96GV9 206 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 YPEL2Q96QA6 119 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 NCOR1P1Q9H4R4 102 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 IL17BQ9UHF5 180 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 ARL2-SNX15V9GYD0 113 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 HMGB3O15347 200 aaKnown RBP5.66□□□□□ -1.5
NKRF-204ENST00000542113 NUBP1P53384 320 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 SSX2Q16385 188 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 ALKBH6Q3KRA9 238 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 TMEM30BQ3MIR4 351 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 ZNF600Q6ZNG1 722 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 LINC01551Q86U37 167 aa5.66□□□□□ -1.5
NKRF-204ENST00000542113 MYPOPQ86VE0 399 aaPredicted RBP5.66□□□□□ -1.5
NKRF-204ENST00000542113 C11orf53Q8IXP5 236 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms