RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ABCA4P78363 2273 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 GRIFINA4D1Z8 144 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 C11orf94C9JXX5 98 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 ATP5G3P48201 142 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 THBS3P49746 956 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 FBXW9Q5XUX1 488 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 TMEM256Q8N2U0 113 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 MRGPRDQ8TDS7 321 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
CNOT9-208ENST00000542068 WDYHV1Q96HA8 205 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 P2RX4Q99571 388 aa12.88□□□□□ -0.35
CNOT9-208ENST00000542068 ODAMA1E959 279 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 TCAPO15273 167 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 NDUFB4O95168 129 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 C1QTNF9P0C862 333 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 TAS2R60P59551 318 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 A8MWP6 167 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 HRASP01112 189 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 RAC2P15153 192 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 SSTP61278 116 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 PPP1CBP62140 327 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 MRPL49Q13405 166 aaKnown RBP12.87□□□□□ -0.35
CNOT9-208ENST00000542068 SCCPDHQ8NBX0 429 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 DEFB124Q8NES8 71 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 Q8NFD4 153 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 TMEM242Q9NWH2 141 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 SPRR3Q9UBC9 169 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
CNOT9-208ENST00000542068 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
CNOT9-208ENST00000542068 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 WDR86Q86TI4 376 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 LSM10Q969L4 123 aaKnown RBP12.87□□□□□ -0.35
CNOT9-208ENST00000542068 IER2Q9BTL4 223 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 ACTR3CQ9C0K3 210 aaPredicted RBP12.87□□□□□ -0.35
CNOT9-208ENST00000542068 DMXL2Q8TDJ6 3036 aa12.87□□□□□ -0.35
CNOT9-208ENST00000542068 LRP5LA4QPB2 252 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 NPPCP23582 126 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 PAX5Q02548 391 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 BATFQ16520 125 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 SAXO1Q8IYX7 474 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 DTD1Q8TEA8 209 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 DCTN5Q9BTE1 182 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 DVL1O14640 695 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 Q6P435 159 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 RTL8AQ9BWD3 113 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 TRAPPC1Q9Y5R8 145 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 ST8SIA5O15466 376 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 TIMM8AO60220 97 aaPredicted RBP12.86□□□□□ -0.35
CNOT9-208ENST00000542068 SLC25A6P12236 298 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 COX5AP20674 150 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 VKORC1L1Q8N0U8 176 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 TMEM18Q96B42 140 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 NEIL1Q96FI4 390 aaPredicted RBP12.86□□□□□ -0.35
CNOT9-208ENST00000542068 KCNIP1Q9NZI2 227 aa12.86□□□□□ -0.35
CNOT9-208ENST00000542068 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 NUPR1O60356 82 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 PSPNO60542 156 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 SPINK4O60575 86 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 RPL29P47914 159 aaKnown RBP12.85□□□□□ -0.35
CNOT9-208ENST00000542068 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 ZNF114Q8NC26 417 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 NINJ1Q92982 152 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 IMMP2LQ96T52 175 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 AKAP6Q13023 2319 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 ATMQ13315 3056 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 C21orf140B9A014 251 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 TGOLN2O43493 480 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 TEX38Q6PEX7 206 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 ZNF705AQ6ZN79 300 aaPredicted RBP12.85□□□□□ -0.35
CNOT9-208ENST00000542068 OR5R1Q8NH85 324 aa12.85□□□□□ -0.35
CNOT9-208ENST00000542068 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 J3QT63 122 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 TRIP6Q15654 476 aaKnown RBP12.84□□□□□ -0.35
CNOT9-208ENST00000542068 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 ARFGEF3Q5TH69 2177 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 IGKV3D-15A0A087WSY6 115 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 A0A1W2PPV4 95 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 IL3RAP26951 378 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 SSTR5P35346 364 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 CDC34P49427 236 aaPredicted RBP12.84□□□□□ -0.35
CNOT9-208ENST00000542068 TMEM178AQ8NBL3 297 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 NPCDR1Q9BY65 106 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 PSG11Q9UQ72 335 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 MSMO1Q15800 293 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 TMEM14EPQ6UXP3 125 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 FDCSPQ8NFU4 85 aa12.84□□□□□ -0.35
CNOT9-208ENST00000542068 OR5B21A6NL26 309 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 C12orf77C9JDV5 145 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 GCH1P30793 250 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 ZNF497Q6ZNH5 498 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 SGMS2Q8NHU3 365 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 C5orf30Q96GV9 206 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.83□□□□□ -0.36
CNOT9-208ENST00000542068 MPC1Q9Y5U8 109 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 LRRC30A6NM36 301 aa12.83□□□□□ -0.36
CNOT9-208ENST00000542068 SH2D1BO14796 132 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms