RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 KIF26BQ2KJY2 2108 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 ZNF250P15622 560 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 TDGF1P3P51864 188 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 TMEM240Q5SV17 173 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 TMEM74BQ9NUR3 256 aa13.29□□□□□ -0.28
HMGA2-210ENST00000541363 RALGAPA1Q6GYQ0 2036 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 SRSF4Q08170 494 aaKnown RBP13.28□□□□□ -0.28
HMGA2-210ENST00000541363 KIAA1644Q3SXP7 199 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 C1orf210Q8IVY1 113 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 CLDND2Q8NHS1 167 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 PNLIPP16233 465 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 FAM89BQ8N5H3 189 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 GCM2O75603 506 aaPredicted RBP13.28□□□□□ -0.28
HMGA2-210ENST00000541363 CRYBB3P26998 211 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 FCARP24071 287 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 RND2P52198 227 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 RSPO2Q6UXX9 243 aaPredicted RBP13.28□□□□□ -0.28
HMGA2-210ENST00000541363 C16orf47Q6ZP98 133 aaPredicted RBP13.28□□□□□ -0.28
HMGA2-210ENST00000541363 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 IGHV1OR21-1A0A087WYE8 117 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 PRR32B1ATL7 298 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 Q6ZNB5 142 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 TP53I13Q8NBR0 393 aaPredicted RBP13.28□□□□□ -0.28
HMGA2-210ENST00000541363 KDM3BQ7LBC6 1761 aa13.28□□□□□ -0.28
HMGA2-210ENST00000541363 MGST3O14880 152 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 KLK13Q9UKR3 277 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 V9GYH0 126 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 LY6EQ16553 131 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 KCNS1Q96KK3 526 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 RASL10BQ96S79 203 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 SDF2L1Q9HCN8 221 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 IDI2-AS1Q9NZ38 188 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 KIAA1217Q5T5P2 1943 aa13.27□□□□□ -0.28
HMGA2-210ENST00000541363 FLRT3Q9NZU0 649 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 GRIFINA4D1Z8 144 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 M0R381 172 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 G6PC2Q9NQR9 355 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 CD69Q07108 199 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 SEMA5BQ9P283 1151 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 ST6GALNAC2Q9UJ37 374 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 NACAE9PAV3 2078 aa13.27□□□□□ -0.29
HMGA2-210ENST00000541363 TMEM229AB2RXF0 380 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 PEX7O00628 323 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 TMEM42Q69YG0 159 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 REG1AP05451 166 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
HMGA2-210ENST00000541363 CALYQ9NYX4 217 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 CEACAM21Q3KPI0 293 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 WDR82Q6UXN9 313 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 SIGMAR1Q99720 223 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 NDUFA2O43678 99 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 PRSS41Q7RTY9 318 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 ITLN2Q8WWU7 325 aaPredicted RBP13.26□□□□□ -0.29
HMGA2-210ENST00000541363 FGF12P61328 243 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 CCL8P80075 99 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 IGKV3D-20A0A0C4DH25 116 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 GLIPR1P48060 266 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 NKG7Q16617 165 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 LRTM2Q8N967 370 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 NPIPB4C9JG80 1138 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 GGACTQ9BVM4 153 aa13.26□□□□□ -0.29
HMGA2-210ENST00000541363 A0A1W2PP11 408 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 ISG15P05161 165 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 ZFP36L2P47974 494 aaKnown RBP13.25□□□□□ -0.29
HMGA2-210ENST00000541363 C14orf144Q96I85 54 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 CXorf51AA0A1B0GTR3 108 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 CDC42EP2O14613 210 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 DNM1P46Q6ZS02 220 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.25□□□□□ -0.29
HMGA2-210ENST00000541363 NAPSAO96009 420 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 ATG4DQ86TL0 474 aaPredicted RBP13.25□□□□□ -0.29
HMGA2-210ENST00000541363 ZNF488Q96MN9 340 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 APOHP02749 345 aaPredicted RBP13.25□□□□□ -0.29
HMGA2-210ENST00000541363 TCRBV5S1A1TA0A578 114 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 CCL19Q99731 98 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 WNT10AQ9GZT5 417 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 EIF3GO75821 320 aaKnown RBP eCLIP13.25□□□□□ -0.29
HMGA2-210ENST00000541363 TMEM222Q9H0R3 208 aa13.25□□□□□ -0.29
HMGA2-210ENST00000541363 HTN3P15516 51 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 ELOVL5Q9NYP7 299 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 FAM90A26D6RGX4 464 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 S100A7L2Q5SY68 101 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 CBLN3Q6UW01 205 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 PUSL1Q8N0Z8 303 aaKnown RBP13.24□□□□□ -0.29
HMGA2-210ENST00000541363 LINC01565O15544 149 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 PAX1P15863 534 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 HMGA2P52926 109 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 HIST1H4AP62805 103 aaKnown RBP13.24□□□□□ -0.29
HMGA2-210ENST00000541363 CENPWQ5EE01 88 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 LINC00305Q7Z4B0 112 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 PGPEP1LA6NFU8 196 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 NPIPB11E5RHQ5 1161 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 HOXD4P09016 255 aaPredicted RBP13.24□□□□□ -0.29
HMGA2-210ENST00000541363 MPV17P39210 176 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 VAX1Q5SQQ9 334 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 TMEM86BQ8N661 226 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 C5orf30Q96GV9 206 aa13.24□□□□□ -0.29
HMGA2-210ENST00000541363 LINC01587Q99440 93 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms