RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 HSPB7Q9UBY9 170 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 TIMM9Q9Y5J7 89 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 ICE1Q9Y2F5 2266 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 CACNA1DQ01668 2161 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 ODAMA1E959 279 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 RNF212BA8MTL3 300 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 SH2D1BO14796 132 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 HAND1O96004 215 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 COX5AP20674 150 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 GALR1P47211 349 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 ZNF83P51522 516 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 TFF3Q07654 80 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 VHLLQ6RSH7 139 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 Q6ZR03 302 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 TMEM183AQ8IXX5 376 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 ZNF645Q8N7E2 425 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 OR4F5Q8NH21 305 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 OR4F4Q96R69 305 aa10.46□□□□□ -0.74
RNF4-222ENST00000541204 IGHV1-18A0A0C4DH31 117 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 ZG16O60844 167 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 S1PR2O95136 353 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 FGF7P21781 194 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 OR3A1P47881 315 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 AESQ08117 197 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 PMS2P11Q13670 270 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 ZNF146Q15072 292 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 SPINK9Q5DT21 86 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 BTNL3Q6UXE8 466 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 Q8IYB0 196 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 OR52L2PQ8NGH6 319 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 OR51G1Q8NGK1 321 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 APC2O95996 2303 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 CTXND1A0A1B0GTU2 59 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 LRRC30A6NM36 301 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 H7BYZ3 331 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 DDTP30046 118 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 PKIAP61925 76 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 P2RY6Q15077 328 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 FFAR4Q5NUL3 377 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 CENPVQ7Z7K6 275 aaPredicted RBP10.45□□□□□ -0.74
RNF4-222ENST00000541204 PCGF1Q9BSM1 259 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 HEATR1Q9H583 2144 aaKnown RBP10.45□□□□□ -0.74
RNF4-222ENST00000541204 ZNF71Q9NQZ8 489 aaPredicted RBP10.45□□□□□ -0.74
RNF4-222ENST00000541204 PLSCR4Q9NRQ2 329 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 USF3Q68DE3 2245 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 PTPRBP23467 1997 aa10.45□□□□□ -0.74
RNF4-222ENST00000541204 ACACAQ13085 2346 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 AHRRA9YTQ3 701 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 GCH1P30793 250 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 BHLHA15Q7RTS1 189 aaPredicted RBP10.44□□□□□ -0.74
RNF4-222ENST00000541204 LRP11Q86VZ4 500 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 GALMQ96C23 342 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 MEGF10Q96KG7 1140 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 OR5B12Q96R08 314 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 PYGO2Q9BRQ0 406 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 KCNIP1Q9NZI2 227 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 IGHV2OR16-5A0A0B4J2B6 119 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 A0A1W2PPQ1 181 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 PMS2P5A8MQ11 134 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 C17orf98A8MV24 154 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 C12orf77C9JDV5 145 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 PPP5D1E7EU14 171 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 TSTD3H0UI37 97 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 AMBPP02760 352 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 BRWD1-AS2P59051 145 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 LINC00205P59089 165 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 MSMO1Q15800 293 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 C11orf53Q8IXP5 236 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 OR5T1Q8NG75 326 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 OR10P1Q8NGE3 313 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 OR1P1Q8NH06 330 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 DTD1Q8TEA8 209 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 RAB24Q969Q5 203 aa10.44□□□□□ -0.74
RNF4-222ENST00000541204 A0A087X0M5 115 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 A0A1B0GX30 115 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 XKRY2A2RUG3 117 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 J3QW42 95 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 M0R1B8 84 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 PAGE4O60829 102 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 RBMXL2O75526 392 aaKnown RBP10.43□□□□□ -0.74
RNF4-222ENST00000541204 CEACAM4O75871 244 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 P0C879 139 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 GABRA2P47869 451 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 DNLZQ5SXM8 178 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 ZNF66Q6ZN08 573 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 PLPPR2Q96GM1 343 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 NPCDR1Q9BY65 106 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.43□□□□□ -0.74
RNF4-222ENST00000541204 ADGRG4Q8IZF6 3080 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.43□□□□□ -0.74
RNF4-222ENST00000541204 LTC4SQ16873 150 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 RFESDQ8TAC1 157 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 MRGPRDQ8TDS7 321 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 CGAP01215 116 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 GYPAP02724 150 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 GZMBP10144 247 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms