RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 RBKSQ9H477 322 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 EXOGQ9Y2C4 368 aaKnown RBP8.65□□□□□ -1.02
TRERF1-205ENST00000541110 MPV17P39210 176 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 EWSR1Q01844 656 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRERF1-205ENST00000541110 PQLC2Q6ZP29 291 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 A0A0G2JLM5 398 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 APOBEC3AP31941 199 aaPredicted RBP8.65□□□□□ -1.02
TRERF1-205ENST00000541110 FOXL2P58012 376 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 COLCA1Q6ZS62 124 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 SPSB4Q96A44 273 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 SCMH1Q96GD3 660 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 LBHQ53QV2 105 aaPredicted RBP8.65□□□□□ -1.02
TRERF1-205ENST00000541110 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
TRERF1-205ENST00000541110 EDA2RQ9HAV5 297 aa8.65□□□□□ -1.02
TRERF1-205ENST00000541110 EDIL3O43854 480 aa8.65□□□□□ -1.03
TRERF1-205ENST00000541110 CISD3P0C7P0 127 aa8.65□□□□□ -1.03
TRERF1-205ENST00000541110 C3orf56Q8N813 242 aa8.65□□□□□ -1.03
TRERF1-205ENST00000541110 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.03
TRERF1-205ENST00000541110 EIF3GO75821 320 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRERF1-205ENST00000541110 ALX3O95076 343 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 OR2H2O95918 312 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 DRD3P35462 400 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 CLPPQ16740 277 aaPredicted RBP8.64□□□□□ -1.03
TRERF1-205ENST00000541110 MESTQ5EB52 335 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 SDF2L1Q9HCN8 221 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 PATJQ8NI35 1801 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 TRBV5-4A0A0C4DH59 114 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 ASAH2BP0C7U1 165 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 CLEC19AQ6UXS0 136 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 DNM1P46Q6ZS02 220 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 TCF24Q7RTU0 167 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 B9A039 149 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 UPK3AO75631 287 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 IGKV1D-33P01593 117 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 IGKV1-33P01594 117 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 DSPPQ9NZW4 1301 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 SYNGR3O43761 229 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 SEC11BP0C7V7 166 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 ALG14Q96F25 216 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 LOXL4Q96JB6 756 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 ZNF430Q9H8G1 570 aaPredicted RBP8.64□□□□□ -1.03
TRERF1-205ENST00000541110 SLC6A13Q9NSD5 602 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 MGST3O14880 152 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 TCF21O43680 179 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 ZNF385AQ96PM9 386 aaKnown RBP8.64□□□□□ -1.03
TRERF1-205ENST00000541110 DOCK11Q5JSL3 2073 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 FUCA1P04066 466 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 DDA1Q9BW61 102 aa8.64□□□□□ -1.03
TRERF1-205ENST00000541110 TMEFF2Q9UIK5 374 aaPredicted RBP8.64□□□□□ -1.03
TRERF1-205ENST00000541110 CTXND1A0A1B0GTU2 59 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 ZIC3O60481 467 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 SNAI3Q3KNW1 292 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 CEACAM21Q3KPI0 293 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 SFXN3Q9BWM7 321 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 TMEM106BQ9NUM4 274 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 KIAA2026Q5HYC2 2103 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 AWAT1Q58HT5 328 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 SAMD13Q5VXD3 122 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 SPNS2Q8IVW8 549 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 XIRP1Q702N8 1843 aaKnown RBP8.63□□□□□ -1.03
TRERF1-205ENST00000541110 NDUFB4O95168 129 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 RPL32P62910 135 aaKnown RBP8.63□□□□□ -1.03
TRERF1-205ENST00000541110 GOLT1AQ6ZVE7 132 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 MARS2Q96GW9 593 aaKnown RBP8.63□□□□□ -1.03
TRERF1-205ENST00000541110 DNAJC4Q9NNZ3 241 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 TCRBV5S2A0A599 114 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 SRD5A1P18405 259 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 WNT2BQ93097 391 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 CST9LQ9H4G1 147 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 MRM2Q9UI43 246 aaKnown RBP8.63□□□□□ -1.03
TRERF1-205ENST00000541110 PITX3O75364 302 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 ASIPP42127 132 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 RBM11P57052 281 aaKnown RBP8.63□□□□□ -1.03
TRERF1-205ENST00000541110 A0A1W2PQD3 144 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 ANKRD20A5PA0PJZ0 165 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 C7orf66A4D0T2 115 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 ARL14EPLP0DKL9 152 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 TSPAN7P41732 249 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 ZNF506Q5JVG8 444 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 ST6GALNAC2Q9UJ37 374 aa8.63□□□□□ -1.03
TRERF1-205ENST00000541110 FAM74A7A6NL05 159 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 NDUFA3O95167 84 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 CD8AP01732 235 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 CGB3P0DN86 165 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 C18orf15Q96N68 181 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 DOPEY2Q9Y3R5 2298 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 IGHV3-11P01762 117 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 RPS11P62280 158 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRERF1-205ENST00000541110 IGSF11Q5DX21 431 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 S100A7L2Q5SY68 101 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 Q6ZNX1 250 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 OR51M1Q9H341 326 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 ELOVL5Q9NYP7 299 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 LHBP01229 141 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 LY6DQ14210 128 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 WDR82Q6UXN9 313 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 OR8D4Q8NGM9 314 aa8.62□□□□□ -1.03
TRERF1-205ENST00000541110 BCORQ6W2J9 1755 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms