RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 LINC00311Q8N616 119 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 RNASE11Q8TAA1 199 aaKnown RBP5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 MITD1Q8WV92 249 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 RPEQ96AT9 228 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 MSI2Q96DH6 328 aaKnown RBP5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 GALNT14Q96FL9 552 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 ADTRPQ96IZ2 230 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 TP53RKQ96S44 253 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 HSD17B10Q99714 261 aaKnown RBP5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 TMEM222Q9H0R3 208 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 SIRPDQ9H106 197 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNRD1Q9P1U0 126 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 MGAT4CQ9UBM8 478 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 GAB2Q9UQC2 676 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 HIVEP1P15822 2718 aa5.4□□□□□ -1.55
CLTCL1-206ENST00000540896 ACANP16112 2415 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 IGHV3OR16-10A0A075B7F0 116 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 A0A096LNT2 108 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 A0A0B4J2A0 478 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 C5orf51A6NDU8 294 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 A8MV72 311 aaPredicted RBP5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 H0Y980 276 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 BUB1B-PAK6H3BSN5 160 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 H7C2Y5 167 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 GOSR2O14653 212 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 FCGR3BO75015 233 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 APOA2P02652 100 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 HOXB5P09067 269 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 CD99P14209 185 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 DUTP33316 252 aaKnown RBP5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 KIR2DS2P43631 304 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 UBE2E1P51965 193 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 CD83Q01151 205 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 TMEM187Q14656 261 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 FCN2Q15485 313 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 RTL8BQ17RB0 113 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 TMEM249Q2WGJ8 235 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 HLA-DRB5Q30154 266 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 ANKRD55Q3KP44 614 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 CYB5R2Q6BCY4 276 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 ZNF833PQ6ZTB9 187 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 MOB3BQ86TA1 216 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 AKAP14Q86UN6 197 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 TCTEX1D1Q8N7M0 179 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 BEND2Q8NDZ0 799 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 OR11H6Q8NGC7 330 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 CD300LFQ8TDQ1 290 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 GLYATL2Q8WU03 294 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 C1orf159Q96HA4 380 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 C18orf12Q96KH6 178 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 TBX15Q96SF7 602 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 PDCD10Q9BUL8 212 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 CHIAQ9BZP6 476 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 UNKLQ9H9P5 680 aaKnown RBP5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 DPM3Q9P2X0 92 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 SHPKQ9UHJ6 478 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 HILPDAQ9Y5L2 63 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 KIAA2026Q5HYC2 2103 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 MALRD1Q5VYJ5 2156 aa5.39□□□□□ -1.55
CLTCL1-206ENST00000540896 CENPVL3A0A0U1RRI6 287 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 LINC00473A8K010 186 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 RNASEK-C17orf49H0YIS7 233 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 J3QLI3 93 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 CCSO14618 274 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 TXNL1O43396 289 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 RAMP3O60896 148 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 PROP1O75360 226 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ATG12O94817 140 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 SIX6O95475 246 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 CDS2O95674 445 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 KRASP01116 189 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 IGLV1-47P01700 117 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 CT45A6P0DMU7 189 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 CT45A5P0DMU8 189 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 CT45A7P0DMV0 189 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 IGHV4-31P0DP07 118 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 RRASP10301 218 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 MMP9P14780 707 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 RPA2P15927 270 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 UCP1P25874 307 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 MC5RP33032 325 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ARHGDIBP52566 201 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 AKR1C2P52895 323 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 LINC00205P59089 165 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ZNF816Q0VGE8 651 aaPredicted RBP5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 SSX2Q16385 188 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 TPTE2P1Q5T6R2 138 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 GPR157Q5UAW9 335 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 FAM71F2Q6NXP2 309 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 GSG1LQ6UXU4 331 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 LYZL2Q7Z4W2 148 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ODF3L1Q8IXM7 274 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 SELENOHQ8IZQ5 122 aaKnown RBP5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 ZNF383Q8NA42 475 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 OR11H7Q8NGC8 314 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 OR4P4Q8NGL7 312 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 OR4S2Q8NH73 311 aa5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 RBPMSQ93062 196 aaKnown RBP5.38□□□□□ -1.55
CLTCL1-206ENST00000540896 RRNAD1Q96FB5 475 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms