RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, human

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-229	ENST00000540643	SCN5A	Q14524	2016 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	PSMB11	A5LHX3	300 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	SERINC4	A6NH21	518 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	SPRY1	O43609	319 aa	Predicted RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	WISP3	O95389	354 aa	Predicted RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	ITGBL1	O95965	494 aa	Predicted RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	RPL27	P61353	136 aa	Known RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	ZNF766	Q5HY98	468 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	DEFB125	Q8N687	156 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	OR8B8	Q15620	311 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	KISS1	Q15726	138 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	FAM90A2P	Q658T7	463 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	OR4C13	Q8NGP0	309 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	PHF7	Q9BWX1	381 aa	Predicted RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	PRTFDC1	Q9NRG1	225 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	TRAV38-1	A0A0B4J264	116 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	RPS11	P62280	158 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	DOK3	Q7L591	496 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	SPSB4	Q96A44	273 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	PNRC2	Q9NPJ4	139 aa	Known RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	BEX4	Q9NWD9	120 aa	Predicted RBP	11.16	□□□□□ -0.62
SFI1-229	ENST00000540643		R4GN57	208 aa		11.16	□□□□□ -0.62
SFI1-229	ENST00000540643	IGLC1	P0CG04	106 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	VEGFB	P49765	207 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	YRDC	Q86U90	279 aa	Known RBP	11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	BCL6B	Q8N143	479 aa	Predicted RBP	11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	RDH5	Q92781	318 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	MRGPRF	Q96AM1	343 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	CDX2	Q99626	313 aa	Predicted RBP	11.15	□□□□□ -0.62
SFI1-229	ENST00000540643		A4D1N5	150 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	C9orf172	C9J069	976 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	NUPR1	O60356	82 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	RHOB	P62745	196 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	RPL8	P62917	257 aa	Known RBP	11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	OR4X2	Q8NGF9	303 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	ZPLD1	Q8TCW7	415 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	OOEP	A6NGQ2	149 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643		M0QXV9	152 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	CEACAM5	P06731	702 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	HSD11B1L	Q7Z5J1	315 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	NPVF	Q9HCQ7	196 aa		11.15	□□□□□ -0.62
SFI1-229	ENST00000540643	FAM181B	A6NEQ2	426 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	NAPSA	O96009	420 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	IFITM1	P13164	125 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	CCL2	P13500	99 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	RPL32	P62910	135 aa	Known RBP	11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	COA6	Q5JTJ3	125 aa	Known RBP	11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	LRTM2	Q8N967	370 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	FADS6	Q8N9I5	356 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	RAB1B	Q9H0U4	201 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	AP5S1	Q9NUS5	200 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	DUSP13	Q9UII6	198 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	PRSS37	A4D1T9	235 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	TAX1BP3	O14907	124 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	PRNP	P04156	253 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	GNG5	P63218	68 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	GUSBP1	Q15486	140 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF595	Q8IYB9	648 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	NABP2	Q9BQ15	211 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	NPFFR1	Q9GZQ6	430 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A1B0GW64	132 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	CRYM-AS1	A6NIL9	109 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	HS3ST1	O14792	307 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	SSTR5	P35346	364 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	LGALS7	P47929	136 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	ATP5G3	P48201	142 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	PRSS8	Q16651	343 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	GAPT	Q8N292	157 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	FAM174A	Q8TBP5	190 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	EDA2R	Q9HAV5	297 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	HCST	Q9UBK5	93 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	KIF13B	Q9NQT8	1826 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643		A8MWV9	139 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF732	B4DXR9	585 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643		H3BRM9	83 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	SRF	P11831	508 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	MYO7B	Q6PIF6	2116 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	NT5C	Q8TCD5	201 aa		11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	BOK	Q9UMX3	212 aa	Predicted RBP	11.14	□□□□□ -0.63
SFI1-229	ENST00000540643	TRBV5-5	A0A0J9YX44	114 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF840P	A6NDX5	716 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	NGFR	P08138	427 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	HERVK_113	P61574	105 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	RPL31	P62899	125 aa	Known RBP	11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	TNXA	Q16473	311 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	RLF	Q13129	1914 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643		A0A1W2PRU2	124 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	GALR2	O43603	387 aa	Predicted RBP	11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	PPY	P01298	95 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	RAB1C	Q92928	201 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNF391	Q9UJN7	358 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	EML2	O95834	649 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	PDLIM4	P50479	330 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	AMTN	Q6UX39	209 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	MMP17	Q9ULZ9	603 aa		11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	TRIP12	Q14669	1992 aa	Predicted RBP	11.13	□□□□□ -0.63
SFI1-229	ENST00000540643	AHCTF1	Q8WYP5	2266 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms