RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 VKORC1Q9BQB6 163 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 ZFP30Q9Y2G7 519 aa8.08□□□□□ -1.12
CLIP1-212ENST00000540304 DUXBA0A1W2PPF3 345 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 GGCTO75223 188 aaKnown RBP8.07□□□□□ -1.12
CLIP1-212ENST00000540304 CDS2O95674 445 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 PRDX2P32119 198 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 GABRA2P47869 451 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 SLC35E3Q7Z769 313 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 MOGAT3Q86VF5 341 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 CD177Q8N6Q3 437 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 OR5D13Q8NGL4 314 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 ITLN1Q8WWA0 313 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 WFIKKN1Q96NZ8 548 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 RPS10P5Q9NQ39 176 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 LSM5Q9Y4Y9 91 aaKnown RBP8.07□□□□□ -1.12
CLIP1-212ENST00000540304 C12orf77C9JDV5 145 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 K7EPK0 472 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 TNFSF12O43508 249 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 THBDP07204 575 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 WNT2P09544 360 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 PSG2P11465 335 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 F2RP25116 425 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 GATA4P43694 442 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 RPL29P47914 159 aaKnown RBP8.07□□□□□ -1.12
CLIP1-212ENST00000540304 PAX5Q02548 391 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 SPRNQ5BIV9 151 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 FAM71E2Q8N5Q1 922 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 FAM24BQ8N5W8 94 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 GCSAMQ8N6F7 178 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 IL22RA2Q969J5 263 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 GALMQ96C23 342 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 MALSU1Q96EH3 234 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 AKR1E2Q96JD6 320 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 SPIN2AQ99865 258 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 SPIN2BQ9BPZ2 258 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 UQCC1Q9NVA1 299 aa8.07□□□□□ -1.12
CLIP1-212ENST00000540304 PIGBOS1A0A0B4J2F0 54 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 DPRXA6NFQ7 191 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 CYB5BO43169 146 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 IGHV1-46P01743 117 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 HKR1P10072 659 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 GZMBP10144 247 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 KLRB1Q12918 225 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 AKR1C8PQ5T2L2 129 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 OR1L1Q8NH94 360 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 NAGKQ9UJ70 344 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 IGKV1D-17A0A075B6S4 117 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 LOC102724200A0A096LPH7 203 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-212ENST00000540304 TRGV8A0A0C4DH27 118 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 NKX2-6A6NCS4 301 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 E5RGE8 158 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 AGPAT2O15120 278 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 ZNF737O75373 536 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 LHBP01229 141 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 IGLV2-14P01704 120 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 TPT1P13693 172 aaKnown RBP8.06□□□□□ -1.12
CLIP1-212ENST00000540304 TNFSF4P23510 183 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 TNFAIP6P98066 277 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-212ENST00000540304 BSPH1Q075Z2 132 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 TRAT1Q6PIZ9 186 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 OR4D5Q8NGN0 318 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 PPP1R35Q8TAP8 253 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 CACNG8Q8WXS5 425 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 PLEKHA2Q9HB19 425 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 KCNS2Q9ULS6 477 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 NSG2Q9Y328 171 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 FAM96BQ9Y3D0 163 aa8.06□□□□□ -1.12
CLIP1-212ENST00000540304 ZNF705GA8MUZ8 300 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-212ENST00000540304 TAAR5O14804 337 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 PPP1R2P9O14990 202 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 ST8SIA3O43173 380 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 HBZP02008 142 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 VDAC1P21796 283 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 RPL12P30050 165 aaKnown RBP8.05□□□□□ -1.12
CLIP1-212ENST00000540304 GLIPR1P48060 266 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 FAM53AQ6NSI3 398 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-212ENST00000540304 ST6GALNAC3Q8NDV1 305 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 OR51H1Q8NH63 302 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 ERGIC1Q969X5 290 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 PARP12Q9H0J9 701 aaKnown RBP8.05□□□□□ -1.12
CLIP1-212ENST00000540304 POLEQ07864 2286 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 LRBAP50851 2863 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 COL6A6A6NMZ7 2263 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 IGHV3OR15-7A0A075B7D8 119 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 BRI3O95415 125 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 OR8U9P0C7N5 309 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 EPHA1P21709 976 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 JOSD1Q15040 202 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-212ENST00000540304 BATFQ16520 125 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 NMSQ5H8A3 153 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 PRAMEF5Q5TYX0 476 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 SNX22Q96L94 193 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 GCM1Q9NP62 436 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 PPP1R3CQ9UQK1 317 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 POMT1Q9Y6A1 747 aa8.05□□□□□ -1.12
CLIP1-212ENST00000540304 SMCO3A2RU48 225 aa8.04□□□□□ -1.12
CLIP1-212ENST00000540304 CLEC18AA5D8T8 446 aa8.04□□□□□ -1.12
CLIP1-212ENST00000540304 MGST3O14880 152 aa8.04□□□□□ -1.12
CLIP1-212ENST00000540304 ADAM20O43506 726 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms