RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 BARX1Q9HBU1 254 aaPredicted RBP18.38■□□□□ 0.53
HOMER3-204ENST00000539827 KRBOX1C9JBD0 128 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 RBFOX2O43251 390 aaKnown RBP eCLIP18.37■□□□□ 0.53
HOMER3-204ENST00000539827 RBMXL2O75526 392 aaKnown RBP18.37■□□□□ 0.53
HOMER3-204ENST00000539827 EIF4E3Q8N5X7 224 aaKnown RBP18.37■□□□□ 0.53
HOMER3-204ENST00000539827 OR5C1Q8NGR4 320 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 SUN5Q8TC36 379 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 RNF141Q8WVD5 230 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 HSPB7Q9UBY9 170 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 IGFBP2P18065 325 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 RAB1CQ92928 201 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 SMIM8Q96KF7 97 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 WSB1Q9Y6I7 421 aa18.37■□□□□ 0.53
HOMER3-204ENST00000539827 TRBV23-1A0A0A0MS06 115 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 CT45A6P0DMU7 189 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 CT45A5P0DMU8 189 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 CT45A7P0DMV0 189 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 BAXQ07812 192 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 EIF5AL1Q6IS14 154 aaKnown RBP18.36■□□□□ 0.53
HOMER3-204ENST00000539827 HSD17B11Q8NBQ5 300 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 OR4S2Q8NH73 311 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 ADTRPQ96IZ2 230 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 BBC3Q96PG8 261 aaPredicted RBP18.36■□□□□ 0.53
HOMER3-204ENST00000539827 GINS3Q9BRX5 216 aa18.36■□□□□ 0.53
HOMER3-204ENST00000539827 OR2B8PP59922 312 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 ERVK-16P61578 105 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 SPINK9Q5DT21 86 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 OR8B3Q8NGG8 313 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 RAB39BQ96DA2 213 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 TIMD4Q96H15 378 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 OR8B2Q96RD0 313 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 QTRT1Q9BXR0 403 aaKnown RBP18.35■□□□□ 0.53
HOMER3-204ENST00000539827 A6NNC1 897 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 MED6O75586 246 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 NQO2P16083 231 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 SPANXN5Q5MJ07 72 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 STX12Q86Y82 276 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 C11orf42Q8N5U0 333 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 OR1S2Q8NGQ3 325 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 MIOXQ9UGB7 285 aa18.35■□□□□ 0.53
HOMER3-204ENST00000539827 ZNF705EA8MWA4 302 aaPredicted RBP18.34■□□□□ 0.53
HOMER3-204ENST00000539827 A8MXK9 166 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 NDUFS7O75251 213 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 FGF2P09038 288 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 METTL15P1P0C7V9 234 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 IGHV1-8P0DP01 117 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 SULT1A1P50225 295 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 ZDHHC16Q969W1 377 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 NEIL1Q96FI4 390 aaPredicted RBP18.34■□□□□ 0.53
HOMER3-204ENST00000539827 SH3BGRL3Q9H299 93 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 NARFLQ9H6Q4 476 aa18.34■□□□□ 0.53
HOMER3-204ENST00000539827 TRAV3A0A0B4J244 114 aa18.33■□□□□ 0.53
HOMER3-204ENST00000539827 J3QR06 171 aa18.33■□□□□ 0.53
HOMER3-204ENST00000539827 WDR25Q64LD2 544 aaPredicted RBP18.33■□□□□ 0.53
HOMER3-204ENST00000539827 ZNF833PQ6ZTB9 187 aa18.33■□□□□ 0.53
HOMER3-204ENST00000539827 C17orf50Q8WW18 174 aa18.33■□□□□ 0.53
HOMER3-204ENST00000539827 HRNRQ86YZ3 2850 aaPredicted RBP18.33■□□□□ 0.52
HOMER3-204ENST00000539827 SULT1A2P50226 295 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 DLX1P56177 255 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 TAS2R30P59541 319 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 ARL16Q0P5N6 197 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 OR10X1Q8NGY0 326 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 MRPL20Q9BYC9 149 aaKnown RBP18.33■□□□□ 0.52
HOMER3-204ENST00000539827 SLC35D1Q9NTN3 355 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 TMEM140Q9NV12 185 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 RFNGQ9Y644 331 aa18.33■□□□□ 0.52
HOMER3-204ENST00000539827 DOCK11Q5JSL3 2073 aa18.32■□□□□ 0.52
HOMER3-204ENST00000539827 REG1BP48304 166 aa18.32■□□□□ 0.52
HOMER3-204ENST00000539827 PRB3Q04118 309 aaPredicted RBP18.32■□□□□ 0.52
HOMER3-204ENST00000539827 HAPLN4Q86UW8 402 aa18.32■□□□□ 0.52
HOMER3-204ENST00000539827 OR4A16Q8NH70 328 aa18.32■□□□□ 0.52
HOMER3-204ENST00000539827 CHODLQ9H9P2 273 aa18.32■□□□□ 0.52
HOMER3-204ENST00000539827 KMT2BQ9UMN6 2715 aaPredicted RBP18.32■□□□□ 0.52
HOMER3-204ENST00000539827 PPIAL4CA0A0B4J2A2 164 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 CEBPZOSA8MTT3 80 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 PPIAL4GP0DN37 164 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 ZNF266Q14584 549 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 ABHD12Q8N2K0 398 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 LINC00311Q8N616 119 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 DTD1Q8TEA8 209 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 SEC11BP0C7V7 166 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 RNF224P0DH78 156 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 SPP1P10451 314 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 DIAPH2-AS1Q14236 149 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 ZNF596Q8TC21 504 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 ATP5SQ99766 215 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 TMEM133Q9H2Q1 129 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 TMA7Q9Y2S6 64 aaKnown RBP18.31■□□□□ 0.52
HOMER3-204ENST00000539827 CHD6Q8TD26 2715 aa18.31■□□□□ 0.52
HOMER3-204ENST00000539827 RELBQ01201 579 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 OR9G1Q8NH87 305 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 OR4C12Q96R67 309 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 LRBAP50851 2863 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 MALRD1Q5VYJ5 2156 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 A0A087X0M5 115 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 A0A1B0GX30 115 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 FAM90A9PA6NNJ1 464 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 GPR37O15354 613 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 IFNA17P01571 189 aa18.3■□□□□ 0.52
HOMER3-204ENST00000539827 ATP6V0CP27449 155 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms