RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SLC31A2O15432 143 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 HOXA5P20719 270 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 EDDM3BP56851 147 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 C9orf152Q5JTZ5 239 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 TGIF2LYQ8IUE0 185 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 OR4F5Q8NH21 305 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 OR4F4Q96R69 305 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 AGMATQ9BSE5 352 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-210ENST00000539599 CXXC4Q9H2H0 198 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 DSCAMO60469 2012 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 IGKV1D-17A0A075B6S4 117 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 A0A087WWC5 75 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 PGPEP1LA6NFU8 196 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 GUSBP1Q15486 140 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 SDSLQ96GA7 329 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 MEGF10Q96KG7 1140 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 TOLLIPQ9H0E2 274 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 ZNRD1Q9P1U0 126 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 DKK4Q9UBT3 224 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 VAX2Q9UIW0 290 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
UBE3B-210ENST00000539599 PAGE4O60829 102 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 SEM1Q6ZVN7 128 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 C16orf82Q7Z2V1 217 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 C1QL4Q86Z23 238 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
UBE3B-210ENST00000539599 PARD6AQ9NPB6 346 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-210ENST00000539599 GNG12Q9UBI6 72 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 POLEQ07864 2286 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 TNFSF13O75888 250 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 PRDX2P32119 198 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 RAB24Q969Q5 203 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 DERL1Q9BUN8 251 aa11.69□□□□□ -0.54
UBE3B-210ENST00000539599 TMEM210A6NLX4 147 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 SPRY3O43610 288 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 GZMHP20718 246 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 GCH1P30793 250 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 SERF2P84101 59 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 MEF2BQ02080 365 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-210ENST00000539599 MRGPRGQ86SM5 289 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 OR10P1Q8NGE3 313 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 PARLQ9H300 379 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 GAB2Q9UQC2 676 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-210ENST00000539599 C15orf62A8K5M9 175 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 RNF212BA8MTL3 300 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 CYB5R3P00387 301 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-210ENST00000539599 IGHG3P01860 377 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 FTH1P19P0C7X4 201 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 NPPCP23582 126 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 CATR1Q13166 79 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 MOGAT3Q86VF5 341 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 DEFB108BQ8NET1 73 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 R3HDM4Q96D70 268 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 SNRNP40Q96DI7 357 aaKnown RBP11.68□□□□□ -0.54
UBE3B-210ENST00000539599 STARD4Q96DR4 205 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 ACACAQ13085 2346 aa11.68□□□□□ -0.54
UBE3B-210ENST00000539599 M0R1B8 84 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 M0R1X1 148 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 WNT2P09544 360 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 FABP4P15090 132 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 COX5AP20674 150 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 HNF1AP20823 631 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 CDX1P47902 265 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-210ENST00000539599 MSMO1Q15800 293 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 ACSF3Q4G176 576 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-210ENST00000539599 FAM209BQ5JX69 171 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 ABHD12Q8N2K0 398 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 DCAF16Q9NXF7 216 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 CLDN34H7C241 214 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 RRHO14718 337 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 CLDN14O95500 239 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 GPR12P47775 334 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 C1orf87Q8N0U7 546 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 TMEM147Q9BVK8 224 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
UBE3B-210ENST00000539599 OPN1MWP04001 364 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 OPN1MW2P0DN77 364 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 OPN1MW3P0DN78 364 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 ATP5G3P48201 142 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 RPL23P62829 140 aaKnown RBP11.67□□□□□ -0.54
UBE3B-210ENST00000539599 NKX6-1P78426 367 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-210ENST00000539599 SMIM21Q3B7S5 101 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 ZNF718Q3SXZ3 478 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 GCSAMQ8N6F7 178 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 Q8N7P7 452 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 FAM122AQ96E09 287 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 OR2V2Q96R30 315 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 LRBAP50851 2863 aa11.67□□□□□ -0.54
UBE3B-210ENST00000539599 K7EM74 188 aa11.66□□□□□ -0.54
UBE3B-210ENST00000539599 DUTP33316 252 aaKnown RBP11.66□□□□□ -0.54
UBE3B-210ENST00000539599 ZNF383Q8NA42 475 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms