RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CKS2P33552 79 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TNFSF10P50591 281 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 C1orf162Q8NEQ5 155 aaPredicted RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 GALNT14Q96FL9 552 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 MIEN1Q9BRT3 115 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TSC2P49815 1807 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 IGHV3-21A0A0B4J1V1 117 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 A0A1W2PPE3 182 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 CEBPDP49716 269 aaPredicted RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 P2RY4P51582 365 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 SLC25A53Q5H9E4 307 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 ABHD12Q8N2K0 398 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM45BQ96B21 275 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 Q96M66 194 aa5.57□□□□□ -1.52
LSAMP-207ENST00000539563 TRAF4Q9BUZ4 470 aaPredicted RBP5.57□□□□□ -1.52
LSAMP-207ENST00000539563 BTF3P20290 206 aaKnown RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 IGLV3-21P80748 117 aaPredicted RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 KLRB1Q12918 225 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 C10orf128Q5T292 105 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 VN1R17PQ8TDU5 208 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 SPSB4Q96A44 273 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 GPR146Q96CH1 333 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 MAP1LC3AQ9H492 121 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 AUP1Q9Y679 476 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 PCNTO95613 3336 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 C1QCP02747 245 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 APOBEC3AP31941 199 aaPredicted RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 FCGR2BP31994 310 aaPredicted RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 ATP5G2Q06055 141 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 MESP2Q0VG99 397 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 ERASQ7Z444 233 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 FAM216AQ8WUB2 273 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 DDB2Q92466 427 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 WNT5BQ9H1J7 359 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 TMEM140Q9NV12 185 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 TRBV9A0A0B4J1U6 114 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 PGPA6NDG6 321 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 NDUFB4O95168 129 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 MUC1P15941 1255 aaPredicted RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 CDCP2Q5VXM1 449 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF841Q6ZN19 808 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 OR51G1Q8NGK1 321 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 CCL19Q99731 98 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 PRR19A6NJB7 356 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 C8orf88P0DMB2 117 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 Q6ZT83 130 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 OVCH2Q7RTZ1 564 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 CBLN2Q8IUK8 224 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 OR1N2Q8NGR9 330 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 OR9G1Q8NH87 305 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 IGHV1-69-2A0A0G2JMI3 117 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 DIRC3C9JPN6 131 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 GLRXP35754 106 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 C19orf54Q5BKX5 351 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 UNQ5815/PRO19632Q6UWF5 114 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 TPRX1Q8N7U7 411 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 CYB561D1Q8N8Q1 229 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 RGP1Q92546 391 aaPredicted RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 CLEC7AQ9BXN2 247 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 G6PC2Q9NQR9 355 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 PHLDA3Q9Y5J5 127 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 OR4C46A6NHA9 309 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 IGKV3-11P04433 115 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF137PP52743 207 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 PMCHL1Q16048 86 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 RALYQ9UKM9 306 aaKnown RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 PAM16Q9Y3D7 125 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 FANCMQ8IYD8 2048 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 TMSB15BA0A087X1C1 80 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 KBTBD11O94819 623 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 NUDT3O95989 172 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 AMY1AP04745 511 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 TSPOP30536 169 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 MEF2BQ02080 365 aaPredicted RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 PRSS53Q2L4Q9 553 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 RHOVQ96L33 236 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 SOSTQ9BQB4 213 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 NPDC1Q9NQX5 325 aaPredicted RBP5.56□□□□□ -1.52
LSAMP-207ENST00000539563 HSPB7Q9UBY9 170 aa5.56□□□□□ -1.52
LSAMP-207ENST00000539563 A0A1W2PR77 199 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 GCM2O75603 506 aaPredicted RBP5.55□□□□□ -1.52
LSAMP-207ENST00000539563 HLA-DQA1P01909 254 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 NEU4Q8WWR8 484 aaPredicted RBP5.55□□□□□ -1.52
LSAMP-207ENST00000539563 AMELYQ99218 206 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 HERPUD1Q15011 391 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 CXorf66Q5JRM2 361 aaPredicted RBP5.55□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF826PQ6ZT77 177 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 OR51M1Q9H341 326 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 PLXNA3P51805 1871 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 hCG_38984A0A1B0GV85 526 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 CD300CQ08708 224 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 NRN1LQ496H8 165 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 WDR25Q64LD2 544 aaPredicted RBP5.55□□□□□ -1.52
LSAMP-207ENST00000539563 OR52M1Q8NGK5 317 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 ZCCHC14Q8WYQ9 949 aaKnown RBP5.55□□□□□ -1.52
LSAMP-207ENST00000539563 LMX1BO60663 402 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 ABLIM2Q6H8Q1 611 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 HCP5Q6MZN7 132 aa5.55□□□□□ -1.52
LSAMP-207ENST00000539563 ZNF383Q8NA42 475 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms