RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 RTL8BQ17RB0 113 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 GPR157Q5UAW9 335 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 AKAP14Q86UN6 197 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 SELENOHQ8IZQ5 122 aaKnown RBP8.62□□□□□ -1.03
LEMD3-202ENST00000539442 SLC35G3Q8N808 338 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 OR11H7Q8NGC8 314 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 LHFPL5Q8TAF8 219 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 SLC35D1Q9NTN3 355 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
LEMD3-202ENST00000539442 CCDC168Q8NDH2 2452 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 IGHV1-3A0A0C4DH29 117 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 A0A1W2PPI3 338 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 RAMP3O60896 148 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 PFDN1O60925 122 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 ADAP1O75689 374 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 ARHGDIBP52566 201 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 LINC00205P59089 165 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 BPIFB3P59826 476 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 DIAPH2-AS1Q14236 149 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 OR2B11Q5JQS5 317 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 LYZL2Q7Z4W2 148 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 LHFPL4Q7Z7J7 247 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 FAM219AQ8IW50 185 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 PDZD9Q8IXQ8 264 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 CIARTQ8N365 385 aaPredicted RBP8.61□□□□□ -1.03
LEMD3-202ENST00000539442 TEX29Q8N6K0 151 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 LSM10Q969L4 123 aaKnown RBP8.61□□□□□ -1.03
LEMD3-202ENST00000539442 MALSU1Q96EH3 234 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 AIFM2Q9BRQ8 373 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 ITGB1BP2Q9UKP3 347 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 WASHC3Q9Y3C0 194 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.61□□□□□ -1.03
LEMD3-202ENST00000539442 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
LEMD3-202ENST00000539442 CR1P17927 2039 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 A0A1W2PRD5 423 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 A0A1W2PRF3 423 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 A0A1W2PRM7 423 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 CCNKO75909 580 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 OR2A4O95047 310 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 S1PR2O95136 353 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 IGKV1-39P01597 117 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 IGKV1D-39P04432 117 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 HOXB5P09067 269 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 GIPP09681 153 aaPredicted RBP8.6□□□□□ -1.03
LEMD3-202ENST00000539442 CXCL3P19876 107 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 SAA4P35542 130 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 AKR1C2P52895 323 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 SRSF4Q08170 494 aaKnown RBP8.6□□□□□ -1.03
LEMD3-202ENST00000539442 HABP2Q14520 560 aaPredicted RBP8.6□□□□□ -1.03
LEMD3-202ENST00000539442 C2orf68Q2NKX9 166 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 NMSQ5H8A3 153 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 LDLRAD2Q5SZI1 272 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 GGNBP1Q5YKI7 109 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 OR4C13Q8NGP0 309 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 OSR1Q8TAX0 266 aaPredicted RBP8.6□□□□□ -1.03
LEMD3-202ENST00000539442 RRNAD1Q96FB5 475 aaKnown RBP8.6□□□□□ -1.03
LEMD3-202ENST00000539442 OR2A7Q96R45 310 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 SPIN2AQ99865 258 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 SPIN2BQ9BPZ2 258 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 NEURL2Q9BR09 285 aa8.6□□□□□ -1.03
LEMD3-202ENST00000539442 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
LEMD3-202ENST00000539442 WNK2Q9Y3S1 2297 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 C5orf51A6NDU8 294 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 MARCH11A6NNE9 402 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 A8MV72 311 aaPredicted RBP8.59□□□□□ -1.03
LEMD3-202ENST00000539442 H7C2Y5 167 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 CCSO14618 274 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 SMAD7O15105 426 aaKnown RBP8.59□□□□□ -1.03
LEMD3-202ENST00000539442 CRYZL1O95825 349 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 HRASP01112 189 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 SLC25A6P12236 298 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 NQO2P16083 231 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 CD1BP29016 333 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 H2BFSP57053 126 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 RAP2BP61225 183 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 ERVK-16P61578 105 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 CYCSP99999 105 aaKnown RBP8.59□□□□□ -1.03
LEMD3-202ENST00000539442 CD83Q01151 205 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 POU2AF1Q16633 256 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 MOB3BQ86TA1 216 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 RNASE11Q8TAA1 199 aaKnown RBP8.59□□□□□ -1.03
LEMD3-202ENST00000539442 CFHR4Q92496 578 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 FLYWCH2Q96CP2 140 aaKnown RBP8.59□□□□□ -1.03
LEMD3-202ENST00000539442 R3HDM4Q96D70 268 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 SEC22AQ96IW7 307 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 ST6GAL2Q96JF0 529 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 C2orf50Q96LR7 162 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 RNF5Q99942 180 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 PDCD10Q9BUL8 212 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 HILPDAQ9Y5L2 63 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 MMP24Q9Y5R2 645 aa8.59□□□□□ -1.03
LEMD3-202ENST00000539442 ASH1LQ9NR48 2969 aaKnown RBP8.58□□□□□ -1.04
LEMD3-202ENST00000539442 A0A1B0GU03 582 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 C13orf42A0A1B0GVH6 325 aa8.58□□□□□ -1.04
LEMD3-202ENST00000539442 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms