RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 RAB5CP51148 216 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 EFNB2P52799 333 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CRISP1P54107 249 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CTBP2P56545 445 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM50BP56557 158 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 WNT4P56705 351 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CLDN20P56880 219 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RIPPLY3P57055 190 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TAS2R31P59538 309 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SELENOTP62341 195 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RAP1AP62834 184 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PPP3R1P63098 170 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SELENOWP63302 87 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CDK6Q00534 326 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PAX2Q02962 417 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MFGE8Q08431 387 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PLCXD2Q0VAA5 305 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 FOXF1Q12946 379 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SPHARQ15513 63 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1Q1Q15612 314 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 HSPB2Q16082 182 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF74Q16587 644 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CTF1Q16619 201 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 HIST3H3Q16695 136 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 LTC4SQ16873 150 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZSWIM7Q19AV6 140 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 C2orf68Q2NKX9 166 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RPEL1Q2QD12 228 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MS4A18Q3C1V0 323 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 FBXL19-AS1Q494R0 122 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SCGB2B2Q4G0G5 96 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ACSF3Q4G176 576 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM128Q5BJH2 165 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ACTL10Q5JWF8 245 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC25A30Q5SVS4 291 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 NCMAPQ5T1S8 102 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 AVPI1Q5T686 147 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 WDR25Q64LD2 544 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM42Q69YG0 159 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PRR27Q6MZM9 219 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF613Q6PF04 617 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM179BQ7Z7N9 219 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 GALNT10Q86SR1 603 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MOB3BQ86TA1 216 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MRPL52Q86TS9 123 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 IFNEQ86WN2 208 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 NIT1Q86X76 327 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SNX29P2Q8IUI4 249 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC30A8Q8IWU4 369 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PRR22Q8IZ63 422 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DEFB107AQ8IZN7 70 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 C8orf59Q8N0T1 100 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RPRMLQ8N4K4 120 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZADH2Q8N4Q0 377 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CBR4Q8N4T8 237 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM24BQ8N5W8 94 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 COX18Q8N8Q8 333 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZIC4Q8N9L1 334 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM178AQ8NBL3 297 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RELL2Q8NC24 303 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 GJC3Q8NFK1 279 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2T12Q8NG77 320 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR8G5Q8NG78 346 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5AU1Q8NGC0 362 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR10G9Q8NGN4 311 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1B1Q8NGR6 318 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1J2Q8NGS2 313 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1P1Q8NH06 330 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR51F2Q8NH61 342 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5W2Q8NH69 310 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PLPPR1Q8TBJ4 325 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM57AQ8TBR7 257 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 HAVCR2Q8TDQ0 301 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RNF128Q8TEB7 428 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SSMEM1Q8WWF3 244 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ITLN2Q8WWU7 325 aaPredicted RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ACOT12Q8WYK0 555 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DYRK2Q92630 601 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 GHSRQ92847 366 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SNAPC3Q92966 411 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RPUSD4Q96CM3 377 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 MRAP2Q96G30 205 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RBP7Q96R05 134 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 GPER1Q99527 375 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF649Q9BS31 505 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 BTBD10Q9BSF8 475 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 URM1Q9BTM9 101 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 DOHHQ9BU89 302 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SRXN1Q9BYN0 137 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 ABCG5Q9H222 651 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 SEMA6AQ9H2E6 1030 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RNF121Q9H920 327 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 RNF122Q9H9V4 155 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 EFCAB1Q9HAE3 211 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 CACYBPQ9HB71 228 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 PATZ1Q9HBE1 687 aaKnown RBP1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 C3orf14Q9HBI5 128 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 WFDC1Q9HC57 220 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 Q9N2K0 584 aa1.48□□□□□ -2.17
CBX3P4-201ENST00000538909 EXOSC4Q9NPD3 245 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms