RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 IGLV3-21P80748 117 aaPredicted RBP10.48□□□□□ -0.73
USP3-203ENST00000538686 PMP22Q01453 160 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 FAM110CQ1W6H9 321 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 ZNF788Q6ZQV5 615 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 TCEAL8Q8IYN2 117 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 WIPF2Q8TF74 440 aaPredicted RBP10.48□□□□□ -0.73
USP3-203ENST00000538686 ZNF524Q96C55 264 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 FAM110AQ9BQ89 295 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 OSTCQ9NRP0 149 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 STARD5Q9NSY2 213 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 TRAPPC2LQ9UL33 140 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 TRGV10A0A0A0MS01 117 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 A0A1W2PPM0 123 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 PRR19A6NJB7 356 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 H3BUT2 72 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 TUSC2O75896 110 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 FABP2P12104 132 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 PPOXP50336 477 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 PSG7Q13046 419 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 PRSS41Q7RTY9 318 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 OR1F12Q8NHA8 337 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 LMX1AQ8TE12 382 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 C11orf52Q96A22 123 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 MBD6Q96DN6 1003 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 JMJD8Q96S16 334 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 NPCDR1Q9BY65 106 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 KMT2EQ8IZD2 1858 aa10.48□□□□□ -0.73
USP3-203ENST00000538686 ALPK2Q86TB3 2170 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 TMEM131Q92545 1883 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 A0A087X0K7 114 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 A0A0G2JRQ6 117 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 A0A1W2PQD3 144 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 H0YGG7 62 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 SYS1-DBNDD2H3BUS1 97 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 HRKO00198 91 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 LAMTOR5O43504 91 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 PGLYRP1O75594 196 aaPredicted RBP10.47□□□□□ -0.73
USP3-203ENST00000538686 ADH4P08319 380 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 COX8AP10176 69 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 SSBP2P81877 361 aaPredicted RBP10.47□□□□□ -0.73
USP3-203ENST00000538686 SPATA12Q7Z6I5 190 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 OSR2Q8N2R0 312 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 PIGTQ969N2 578 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 C5orf30Q96GV9 206 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 ZNF331Q9NQX6 463 aaPredicted RBP10.47□□□□□ -0.73
USP3-203ENST00000538686 PHPT1Q9NRX4 125 aaPredicted RBP10.47□□□□□ -0.73
USP3-203ENST00000538686 JPT1Q9UK76 154 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 BOKQ9UMX3 212 aaPredicted RBP10.47□□□□□ -0.73
USP3-203ENST00000538686 ATG2BQ96BY7 2078 aa10.47□□□□□ -0.73
USP3-203ENST00000538686 A0A1W2PPV4 95 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 MS4A18H0YCH9 400 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 K7EN84 100 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 HBZP02008 142 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 VWC2Q2TAL6 325 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 MS4A18Q3C1V0 323 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 HLA-DQA1Q5Y7H0 255 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 SHISA2Q6UWI4 295 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 H1FNTQ75WM6 255 aaPredicted RBP10.46□□□□□ -0.73
USP3-203ENST00000538686 BLNKQ8WV28 456 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 PIGLQ9Y2B2 252 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 ZNF835Q9Y2P0 537 aa10.46□□□□□ -0.73
USP3-203ENST00000538686 ADAMTS9Q9P2N4 1935 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 KIR2DS1A0A191URI9 304 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 SCO2A0A1W2PP80 73 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 ANGPTL7O43827 346 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 CXorf1O96002 111 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 IGHG1P01857 330 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 APOA2P02652 100 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 OR9G9P0C7N8 305 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 OTX2P32243 289 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 KIR2DS4P43632 304 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 FABP6P51161 128 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 METAP1P53582 386 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 KIR2DS1Q14954 304 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 TMEM251Q8N6I4 163 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 ZNF418Q8TF45 676 aaPredicted RBP10.46□□□□□ -0.74
USP3-203ENST00000538686 OR2D2Q9H210 308 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 PNRC2Q9NPJ4 139 aaKnown RBP10.46□□□□□ -0.74
USP3-203ENST00000538686 TNFRSF19Q9NS68 423 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 ZNF257Q9Y2Q1 563 aa10.46□□□□□ -0.74
USP3-203ENST00000538686 PHF3Q92576 2039 aaKnown RBP10.46□□□□□ -0.74
USP3-203ENST00000538686 ZNF816-ZNF321PA0A0X1KG74 233 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 EML2O95834 649 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 OR5AL1P0C617 328 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 C17orf67Q0P5P2 114 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 LHX8Q68G74 356 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 RNASEKQ6P5S7 137 aaKnown RBP10.45□□□□□ -0.74
USP3-203ENST00000538686 LHFPL2Q6ZUX7 228 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 MOB1BQ7L9L4 216 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 PERPQ96FX8 193 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 ZNF442Q9H7R0 627 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 MYOFQ9NZM1 2061 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 TRAV38-1A0A0B4J264 116 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 EDDM13A0A1B0GTR0 161 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 SMIM27A0A1W2PRY6 76 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 hDV102S1A0JD36 115 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 IZUMO1RA6ND01 250 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.45□□□□□ -0.74
USP3-203ENST00000538686 ISLRO14498 428 aa10.45□□□□□ -0.74
USP3-203ENST00000538686 FRMD6-AS1P0C7T7 363 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms