RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RPP25LQ8N5L8 163 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-206ENST00000538456 KCNG3Q8TAE7 436 aa10.53□□□□□ -0.72
SMARCA4-206ENST00000538456 TM2D1Q9BX74 207 aa10.53□□□□□ -0.72
SMARCA4-206ENST00000538456 MRPS26Q9BYN8 205 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-206ENST00000538456 RDH8Q9NYR8 311 aa10.53□□□□□ -0.72
SMARCA4-206ENST00000538456 TRBV6-6A0A0A6YYG2 114 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 IGKV1-6A0A0C4DH72 117 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 C2orf70A6NJV1 201 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 FAM223BA6NKX1 122 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 PPP5D1E7EU14 171 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 SOCS1O15524 211 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 TUSC2O75896 110 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 HLA-AP01891 365 aaKnown RBP10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 FOLR2P14207 255 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 ATP5G2Q06055 141 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 ST3GAL4Q11206 333 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 CBX3Q13185 183 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 IDO2Q6ZQW0 420 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 SLC16A13Q7RTY0 426 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 FAM223AQ8IWN6 122 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 TSPAN14Q8NG11 270 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 ACOT12Q8WYK0 555 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 OVOL2Q9BRP0 275 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 OR2D2Q9H210 308 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 Q9N2K0 584 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 C12orf4Q9NQ89 552 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 BATF3Q9NR55 127 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 PLCXD1Q9NUJ7 323 aa10.52□□□□□ -0.73
SMARCA4-206ENST00000538456 A0A087WXM4 84 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 NUPR2A6NF83 97 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 SRRM4A7MD48 611 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 QRFPP83859 136 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 ZNF45Q02386 682 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 MRGPRG-AS1Q2M3A8 158 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 C1orf100Q5SVJ3 147 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 GLT8D1Q68CQ7 371 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 LRRTM1Q86UE6 522 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 SRSF12Q8WXF0 261 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 CACNG8Q8WXS5 425 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 THRSPQ92748 146 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 GGTLC1Q9BX51 225 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 ZC4H2Q9NQZ6 224 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 SCN3BQ9NY72 215 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 MGAT4AQ9UM21 535 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 TPRKBQ9Y3C4 175 aa10.51□□□□□ -0.73
SMARCA4-206ENST00000538456 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 A0A0J9YWU9 116 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 TMEM14DPA8MWL7 114 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 MYL12BO14950 172 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 MRPS14O60783 128 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 CD3GP09693 182 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 KIR2DS2P43631 304 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 PRSS8Q16651 343 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 RTL8BQ17RB0 113 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 ACSM3Q53FZ2 586 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 ZNF773Q6PK81 442 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 BPIFB6Q8NFQ5 453 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 LPAR5Q9H1C0 372 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 DUSP21Q9H596 190 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 SDHAF2Q9NX18 166 aa10.5□□□□□ -0.73
SMARCA4-206ENST00000538456 EFCAB10A6NFE3 127 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 BET1O15155 118 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 OR2J3O76001 311 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 BPNT1O95861 308 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 SRMP19623 302 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 WNT4P56705 351 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 P2RY14Q15391 338 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 C15orf32Q32M92 178 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 VMA21Q3ZAQ7 101 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 TMEM177Q53S58 311 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 TMEM61Q8N0U2 210 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 OR52B4Q8NGK2 314 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 ARHGAP5-AS1Q96IT6 56 aa10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 TECRQ9NZ01 308 aaKnown RBP10.49□□□□□ -0.73
SMARCA4-206ENST00000538456 LOC102724200A0A096LPH7 203 aaPredicted RBP10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 TRBV9A0A0B4J1U6 114 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 TRDCB7Z8K6 153 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 DEDDO75618 318 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 SCAF4O95104 1147 aaKnown RBP10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 OR2C1O95371 312 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 CRYZL1O95825 349 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 IGHV3-23P01764 117 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 CD1AP06126 327 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 TAGLNQ01995 201 aaKnown RBP10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 IGSF11Q5DX21 431 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 C10orf55Q5SWW7 151 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 CEMP1Q6PRD7 247 aaPredicted RBP10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 AHSA2Q719I0 299 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 NECAP1Q8NC96 275 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 CMSS1Q9BQ75 279 aaKnown RBP10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 URM1Q9BTM9 101 aaKnown RBP10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 FKBP14Q9NWM8 211 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 PSORS1C1Q9UIG5 152 aa10.48□□□□□ -0.73
SMARCA4-206ENST00000538456 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
SMARCA4-206ENST00000538456 GGCTO75223 188 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms