RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 DUX4L9Q6RFH8 374 aaPredicted RBP9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 WFDC8Q8IUA0 241 aa9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 OR10P1Q8NGE3 313 aa9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 OR10G4Q8NGN3 311 aa9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 DDB2Q92466 427 aa9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 DIRC2Q96SL1 478 aa9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 PRELID3BQ9Y3B1 194 aa9.44□□□□□ -0.9
SLC28A1-204ENST00000538177 LOC102723971A0A1B0GUV8 181 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 CEBPZOSA8MTT3 80 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 SLC31A2O15432 143 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 RBMXL2O75526 392 aaKnown RBP9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 FOLR2P14207 255 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 VWC2Q2TAL6 325 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 CT45A1Q5HYN5 189 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 AVPI1Q5T686 147 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 TCF23Q7RTU1 214 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 DEFB108BQ8NET1 73 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 CT45A3Q8NHU0 189 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 CORO2AQ92828 525 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 SNRNP40Q96DI7 357 aaKnown RBP9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 CCL13Q99616 98 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 C20orf24Q9BUV8 137 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 SCNM1Q9BWG6 230 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 DSCAML1Q8TD84 2053 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 IRF2P14316 349 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 SPCS3P61009 180 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 PMS2P11Q13670 270 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 PDLIM3Q53GG5 364 aaPredicted RBP9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 UTF1Q5T230 341 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 C1orf229Q6ZS94 237 aaPredicted RBP9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 S1PR3Q99500 378 aa9.43□□□□□ -0.9
SLC28A1-204ENST00000538177 ZNF729A6NN14 1252 aaPredicted RBP9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 C15orf62A8K5M9 175 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 C17orf100A8MU93 164 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 IGHV3-7P01780 117 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 GYPAP02724 150 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 OR4A8P0C604 315 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 NQO2P16083 231 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 TNFRSF1AP19438 455 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 MDKP21741 143 aaPredicted RBP9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 BSPH1Q075Z2 132 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 TMEM30BQ3MIR4 351 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 PRAMEF5Q5TYX0 476 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 LCN15Q6UWW0 184 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 SSX7Q7RTT5 188 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 TGIF2LYQ8IUE0 185 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 ZNF439Q8NDP4 499 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 HIST1H2BAQ96A08 127 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 ZNF251Q9BRH9 671 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 CISD1Q9NZ45 108 aaKnown RBP9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 PUS1Q9Y606 427 aaKnown RBP eCLIP9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 LAMA5O15230 3695 aa9.42□□□□□ -0.9
SLC28A1-204ENST00000538177 H3BQ15 152 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 MT-ND4LP03901 98 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 BCL2P10415 239 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 ERVK-16P61578 105 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 RNF212Q495C1 297 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 SPINK9Q5DT21 86 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 FAM216BQ8N7L0 139 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 OR4A16Q8NH70 328 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 LEAP2Q969E1 77 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 DCAF16Q9NXF7 216 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 IDI2-AS1Q9NZ38 188 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 GNG13Q9P2W3 67 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 SH3BGRL2Q9UJC5 107 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 DYSFO75923 2080 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 IFNA17P01571 189 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 IGKV1D-33P01593 117 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 IGKV1-33P01594 117 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 ARG1P05089 322 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 FBP1P09467 338 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 DAOP14920 347 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 OR2B8PP59922 312 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 CCL8P80075 99 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 RELBQ01201 579 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 ZNF429Q86V71 674 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 OR4S2Q8NH73 311 aa9.41□□□□□ -0.9
SLC28A1-204ENST00000538177 HCFC1P51610 2035 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 MAP1LC3B2A6NCE7 125 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 MBP02144 154 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 FGF7P21781 194 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 VDAC2P45880 294 aaPredicted RBP9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 THBS3P49746 956 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 RAB13P51153 203 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 MRPS11P82912 194 aaKnown RBP9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 PRR30Q53SZ7 412 aaPredicted RBP9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 ACSM6Q6P461 480 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 SSX9Q7RTT3 188 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 ADTRPQ96IZ2 230 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 MAP1LC3BQ9GZQ8 125 aa9.4□□□□□ -0.9
SLC28A1-204ENST00000538177 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms