RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 TRAV34A0A0B4J273 112 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 ZNF729A6NN14 1252 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-210ENST00000538120 SRRM5B3KS81 715 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 C12orf77C9JDV5 145 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 CYB5BO43169 146 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 TRGC2P03986 189 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 SOD3P08294 240 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 F2RP25116 425 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 GPX4P36969 197 aaPredicted RBP8.96□□□□□ -0.98
CLIP1-210ENST00000538120 CFHR2P36980 270 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 MZT1Q08AG7 82 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 ZNF266Q14584 549 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 NMSQ5H8A3 153 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 ZNF695Q8IW36 515 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 CMTM1Q8IZ96 169 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 OR5D13Q8NGL4 314 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 OR10D4PQ8NGN7 298 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 DTD1Q8TEA8 209 aa8.96□□□□□ -0.98
CLIP1-210ENST00000538120 GAR1Q9NY12 217 aaKnown RBP8.96□□□□□ -0.98
CLIP1-210ENST00000538120 PITX3O75364 302 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 WNT2P09544 360 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 PSG2P11465 335 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 G0S2P27469 103 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 CEACAM6P40199 344 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 SMIM21Q3B7S5 101 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 SP5Q6BEB4 398 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-210ENST00000538120 GCSAMQ8N6F7 178 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 OR2V2Q96R30 315 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 ELOVL5Q9NYP7 299 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 KIAA1456Q9P272 454 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 RAXQ9Y2V3 346 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 WSB1Q9Y6I7 421 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 IGKV1D-17A0A075B6S4 117 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 CLEC18AA5D8T8 446 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 C16orf97H3BN30 126 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 SPRY3O43610 288 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 ZNF737O75373 536 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 THBDP07204 575 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 PRDX2P32119 198 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 GLIPR1P48060 266 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 CLEC18CQ8NCF0 446 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 IL22RA2Q969J5 263 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 PLEKHF2Q9H8W4 249 aa8.95□□□□□ -0.98
CLIP1-210ENST00000538120 LYRM2Q9NU23 88 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-210ENST00000538120 DUXBA0A1W2PPF3 345 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 H3BP45 60 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 LHBP01229 141 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 HBZP02008 142 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 S100A2P29034 98 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 TMPRSS3P57727 454 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 TPRX1Q8N7U7 411 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 OR52L2PQ8NGH6 319 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 ITLN1Q8WWA0 313 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 NEU1Q99519 415 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 MS4A5Q9H3V2 200 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 ACACAQ13085 2346 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 DPRXA6NFQ7 191 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 OOEPA6NGQ2 149 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 HSPA12AO43301 675 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 CHST1O43916 411 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 IGKV1-39P01597 117 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 IGKV1D-39P04432 117 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 PLA2G5P39877 138 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 PAX5Q02548 391 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 UNQ6494/PRO21346Q6UXR6 183 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 C1orf229Q6ZS94 237 aaPredicted RBP8.94□□□□□ -0.98
CLIP1-210ENST00000538120 OR13A1Q8NGR1 328 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 OR51H1Q8NH63 302 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 CLDND2Q8NHS1 167 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 MRGPRDQ8TDS7 321 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 ABHD5Q8WTS1 349 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 SMDT1Q9H4I9 107 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 KCNIP1Q9NZI2 227 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 PPP1R3CQ9UQK1 317 aa8.94□□□□□ -0.98
CLIP1-210ENST00000538120 HEATR1Q9H583 2144 aaKnown RBP8.94□□□□□ -0.98
CLIP1-210ENST00000538120 IGHV3OR15-7A0A075B7D8 119 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 MDKP21741 143 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-210ENST00000538120 VDAC1P21796 283 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 GABRA2P47869 451 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 RPL23AP62750 156 aaKnown RBP8.93□□□□□ -0.98
CLIP1-210ENST00000538120 VAMP2P63027 116 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 IZUMO4Q1ZYL8 232 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 KHDC3LQ587J8 217 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 FAM90A1Q86YD7 464 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 NUP37Q8NFH4 326 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 TVP23CQ96ET8 276 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 C5orf30Q96GV9 206 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 NIPSNAP3BQ9BS92 247 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 DCTN5Q9BTE1 182 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 PIEZO2Q9H5I5 2752 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 CADP27708 2225 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 A0A087WWC5 75 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 CXorf65A6NEN9 183 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 IGHV1-46P01743 117 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 TRGC1P0CF51 173 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 GATA4P43694 442 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 PAX9P55771 341 aa8.93□□□□□ -0.98
CLIP1-210ENST00000538120 SSX2Q16385 188 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms