RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 DEFB125Q8N687 156 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 KLHDC1Q8N7A1 406 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 CCDC71LQ8N9Z2 235 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 OR10G9Q8NGN4 311 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 OR10G7Q8NGN6 311 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 OR51H1Q8NH63 302 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 CT55Q8WUE5 264 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 APOBEC3DQ96AK3 386 aaPredicted RBP9.02□□□□□ -0.96
RTN3-208ENST00000537981 PLPPR2Q96GM1 343 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 ZNF48Q96MX3 618 aaPredicted RBP9.02□□□□□ -0.96
RTN3-208ENST00000537981 JMJD8Q96S16 334 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 PSMG3Q9BT73 122 aaPredicted RBP9.02□□□□□ -0.96
RTN3-208ENST00000537981 FGF22Q9HCT0 170 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 PNRC2Q9NPJ4 139 aaKnown RBP9.02□□□□□ -0.96
RTN3-208ENST00000537981 THYN1Q9P016 225 aa9.02□□□□□ -0.96
RTN3-208ENST00000537981 IGKV1-12A0A0C4DH73 117 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 H3BMH7 237 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 KLK10O43240 276 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 DNPH1O43598 174 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 IGKV1D-12P01611 117 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 AZU1P20160 251 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 VDAC1P21796 283 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 SRIP30626 198 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 DAZAP2Q15038 168 aaPredicted RBP9.02□□□□□ -0.97
RTN3-208ENST00000537981 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 OR8I2Q8N0Y5 310 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 CRIPAKQ8N1N5 446 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 OR2M7Q8NG81 312 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 OR1L1Q8NH94 360 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 RERGQ96A58 199 aaPredicted RBP9.02□□□□□ -0.97
RTN3-208ENST00000537981 SPIN2AQ99865 258 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 SPIN2BQ9BPZ2 258 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 NPVFQ9HCQ7 196 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 PSENENQ9NZ42 101 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 CD207Q9UJ71 328 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 PIGLQ9Y2B2 252 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 USF3Q68DE3 2245 aa9.02□□□□□ -0.97
RTN3-208ENST00000537981 TRAV26-1A0A087WT03 109 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 A0A087X0K7 114 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 LOC102725191A0A1B0GVB3 256 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 MDFIC2A0A1B0GVS7 189 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 PRR19A6NJB7 356 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 TRAF3IP2O43734 574 aaPredicted RBP9.01□□□□□ -0.97
RTN3-208ENST00000537981 MT-ATP6P00846 226 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 SCTP09683 121 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 DRD3P35462 400 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 GATA4P43694 442 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 TCL1AP56279 114 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 WDR74Q6RFH5 385 aaPredicted RBP9.01□□□□□ -0.97
RTN3-208ENST00000537981 GLMPQ8WWB7 406 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 NAT8BQ9UHF3 227 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 CDC42EP3Q9UKI2 254 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 ABCA7Q8IZY2 2146 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 TRAV9-2A0A087WT02 112 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 TRAV38-1A0A0B4J264 116 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 SCO2A0A1W2PP80 73 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 SH2D7A6NKC9 451 aaPredicted RBP9.01□□□□□ -0.97
RTN3-208ENST00000537981 F5H5K5 113 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 TNFSF14O43557 240 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 SNAI2O43623 268 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 S1PR2O95136 353 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 IGHMP01871 453 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 PSG2P11465 335 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 CEBPDP49716 269 aaPredicted RBP9.01□□□□□ -0.97
RTN3-208ENST00000537981 SERF2P84101 59 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 PMCHL1Q16048 86 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 ACSF3Q4G176 576 aaPredicted RBP9.01□□□□□ -0.97
RTN3-208ENST00000537981 FAM58AQ8N1B3 248 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 OR2AE1Q8NHA4 323 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 DGAT2Q96PD7 388 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 ABI3Q9P2A4 366 aa9.01□□□□□ -0.97
RTN3-208ENST00000537981 H0YJW9 148 aa9□□□□□ -0.97
RTN3-208ENST00000537981 HSPB6O14558 160 aa9□□□□□ -0.97
RTN3-208ENST00000537981 IGKV1-39P01597 117 aa9□□□□□ -0.97
RTN3-208ENST00000537981 IGKV1D-39P04432 117 aa9□□□□□ -0.97
RTN3-208ENST00000537981 ZNF10P21506 573 aaPredicted RBP9□□□□□ -0.97
RTN3-208ENST00000537981 LGALS4P56470 323 aa9□□□□□ -0.97
RTN3-208ENST00000537981 RPS20P60866 119 aaKnown RBP9□□□□□ -0.97
RTN3-208ENST00000537981 HNRNPA1L2Q32P51 320 aaKnown RBP9□□□□□ -0.97
RTN3-208ENST00000537981 LRRC61Q9BV99 259 aa9□□□□□ -0.97
RTN3-208ENST00000537981 FAM231BA6NCW3 169 aa9□□□□□ -0.97
RTN3-208ENST00000537981 MYBPHQ13203 477 aa9□□□□□ -0.97
RTN3-208ENST00000537981 PHYHD1Q5SRE7 291 aa9□□□□□ -0.97
RTN3-208ENST00000537981 MBNL2Q5VZF2 373 aaKnown RBP9□□□□□ -0.97
RTN3-208ENST00000537981 ZNF324BQ6AW86 544 aaPredicted RBP9□□□□□ -0.97
RTN3-208ENST00000537981 LINC00173Q6ZV60 143 aa9□□□□□ -0.97
RTN3-208ENST00000537981 DOK3Q7L591 496 aa9□□□□□ -0.97
RTN3-208ENST00000537981 PNKDQ8N490 385 aa9□□□□□ -0.97
RTN3-208ENST00000537981 DEFB123Q8N688 67 aa9□□□□□ -0.97
RTN3-208ENST00000537981 OR4A5Q8NH83 315 aa9□□□□□ -0.97
RTN3-208ENST00000537981 SFXN3Q9BWM7 321 aa9□□□□□ -0.97
RTN3-208ENST00000537981 KMT2EQ8IZD2 1858 aa9□□□□□ -0.97
RTN3-208ENST00000537981 CTXND1A0A1B0GTU2 59 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 SLC22A20A6NK97 555 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 BMPR1BO00238 502 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 TOX4O94842 621 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 TNFRSF1AP19438 455 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 SPINK2P20155 84 aa8.99□□□□□ -0.97
RTN3-208ENST00000537981 CCL1P22362 96 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms