RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TRA2AQ13595 282 aaKnown RBP eCLIP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM52BQ4KMG9 183 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 SAMD5Q5TGI4 173 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 WNT5BQ9H1J7 359 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM250H0YL14 139 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 EREGO14944 169 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 DHHO43323 396 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 CD8AP01732 235 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 APELAP0DMC3 54 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PLSCR4Q9NRQ2 329 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TNRC6BQ9UPQ9 1833 aaKnown RBP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 CD38P28907 300 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 STARD6P59095 220 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 LAIR2Q6ISS4 152 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 CLEC2AQ6UVW9 174 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 ADAMTSL5Q6ZMM2 481 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 RPS19BP1Q86WX3 136 aaKnown RBP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 WFDC3Q8IUB2 231 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 OR52M1Q8NGK5 317 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 KCNE4Q8WWG9 221 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 OR51B2Q9Y5P1 312 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 ONECUT1Q9UBC0 465 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PRNDQ9UKY0 176 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 MRPS18BQ9Y676 258 aaKnown RBP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 RBFOX2O43251 390 aaKnown RBP eCLIP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TOX2Q96NM4 488 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 ZNF391Q9UJN7 358 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 VSIG8P0DPA2 414 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PNKDQ8N490 385 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 OR8G5Q8NG78 346 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 OR4C3Q8NH37 302 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 NAT6Q93015 286 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 MYEOVQ96EZ4 313 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PPIAL4EA0A075B759 164 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PGPEP1LA6NFU8 196 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 COLCA2A8K830 154 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 RRHO14718 337 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PPIAL4FP0DN26 164 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 GZMMP51124 257 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 SEC11AP67812 179 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PSG6Q00889 435 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM252Q8N6L7 170 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 C8orf44Q96CB5 159 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 RAXQ9Y2V3 346 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 AMMECR1Q9Y4X0 333 aaPredicted RBP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PPIAL4AQ9Y536 164 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PTPRSQ13332 1948 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TRBV5-3A0A0A0MS03 114 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 GNB2P62879 340 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 PATE1Q8WXA2 126 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TAF15Q92804 592 aaKnown RBP eCLIP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 WBP2Q969T9 261 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM106BQ9NUM4 274 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 A0A0G2JLM5 398 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 HEPN1Q6WQI6 88 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 OR2K2Q8NGT1 345 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 FGF21Q9NSA1 209 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 SEMA5BQ9P283 1151 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 COX11Q9Y6N1 276 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 SPANXN1Q5VSR9 72 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 COPS9Q8WXC6 57 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 BOD1Q96IK1 185 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 SSBP3Q9BWW4 388 aaPredicted RBP4.92□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM222Q9H0R3 208 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 HIGD1AQ9Y241 93 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 H0Y980 276 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 NDUFA3O95167 84 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 IGHV4-39P01824 125 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 UMODP07911 640 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 GPR3P46089 330 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 FAM222BQ8WU58 562 aa4.92□□□□□ -1.62
CSMD1-215ENST00000537824 M0R1B8 84 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 SPRY3O43610 288 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 CXCL13O43927 109 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 HTN1P15515 57 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 BHLHA15Q7RTS1 189 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 OR1L8Q8NGR8 309 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 SPSB4Q96A44 273 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 C6orf106Q9H6K1 298 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 PLAUP00749 431 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 C1QAP02745 245 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 KIAA0040Q15053 153 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 GAGE13Q4V321 117 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 LRRC10Q5BKY1 277 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM170AQ8WVE7 144 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 REG4Q9BYZ8 158 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 LRP4O75096 1905 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 A0A1W2PPE3 182 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 MRPL52Q86TS9 123 aaKnown RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 VN1R2Q8NFZ6 395 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 DNASE2BQ8WZ79 361 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 SGK494Q96LW2 274 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 KBTBD11-OT1A0A1B0GTJ5 212 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 COX5BP10606 129 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 LOXL3P58215 753 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 AQP3Q92482 292 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TXNDC17Q9BRA2 123 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 GFRA1P56159 465 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms