RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 HOXA3O43365 443 aaPredicted RBP19.42■□□□□ 0.7
HMGA2-208ENST00000537429 RAMP3O60896 148 aa19.42■□□□□ 0.7
HMGA2-208ENST00000537429 SPNP16150 400 aa19.42■□□□□ 0.7
HMGA2-208ENST00000537429 ANXA7P20073 488 aaKnown RBP19.42■□□□□ 0.7
HMGA2-208ENST00000537429 MECP2P51608 486 aaKnown RBP19.42■□□□□ 0.7
HMGA2-208ENST00000537429 TAS2R31P59538 309 aa19.42■□□□□ 0.7
HMGA2-208ENST00000537429 SUPT4H1P63272 117 aaKnown RBP19.42■□□□□ 0.7
HMGA2-208ENST00000537429 OR2T10Q8NGZ9 312 aa19.42■□□□□ 0.7
HMGA2-208ENST00000537429 CD300LFQ8TDQ1 290 aa19.42■□□□□ 0.7
HMGA2-208ENST00000537429 EAF1Q96JC9 268 aaPredicted RBP19.42■□□□□ 0.7
HMGA2-208ENST00000537429 TP53RKQ96S44 253 aa19.42■□□□□ 0.7
HMGA2-208ENST00000537429 FAM212BQ9NTI7 297 aaPredicted RBP19.42■□□□□ 0.7
HMGA2-208ENST00000537429 TCF19Q9Y242 345 aa19.42■□□□□ 0.7
HMGA2-208ENST00000537429 H0Y980 276 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 RBFOX2O43251 390 aaKnown RBP eCLIP19.41■□□□□ 0.7
HMGA2-208ENST00000537429 MOSP00540 346 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 UBE2MP61081 183 aaKnown RBP19.41■□□□□ 0.7
HMGA2-208ENST00000537429 ZNF585BQ52M93 769 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 DHRS7BQ6IAN0 325 aaPredicted RBP19.41■□□□□ 0.7
HMGA2-208ENST00000537429 OR5R1Q8NH85 324 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 GALNT14Q96FL9 552 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 MARVELD1Q9BSK0 173 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 B3GALNT1O75752 331 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 CRYZL1O95825 349 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 LY6EQ16553 131 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 TMEM177Q53S58 311 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 Q8N6K4 173 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 OR4C13Q8NGP0 309 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 OR4S2Q8NH73 311 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 FLYWCH2Q96CP2 140 aaKnown RBP19.41■□□□□ 0.7
HMGA2-208ENST00000537429 RITA1Q96K30 269 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 DUX5Q96PT3 197 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 KCNIP3Q9Y2W7 256 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 POMT1Q9Y6A1 747 aa19.41■□□□□ 0.7
HMGA2-208ENST00000537429 A6NDX4 124 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 PEX14O75381 377 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 OR5AC1P0C628 307 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 VSIG10L2P0DP72 767 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 CBX3Q13185 183 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 PPP1R1AQ13522 171 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 HNF4GQ14541 408 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 SP6Q3SY56 376 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 CCBE1Q6UXH8 406 aaPredicted RBP19.4■□□□□ 0.7
HMGA2-208ENST00000537429 TMEM86BQ8N661 226 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 GLYATL2Q8WU03 294 aa19.4■□□□□ 0.7
HMGA2-208ENST00000537429 OR4E1P0C645 316 aa19.39■□□□□ 0.69
HMGA2-208ENST00000537429 TMEM11P17152 192 aa19.39■□□□□ 0.69
HMGA2-208ENST00000537429 UCP1P25874 307 aa19.39■□□□□ 0.69
HMGA2-208ENST00000537429 RAG2P55895 527 aa19.39■□□□□ 0.69
HMGA2-208ENST00000537429 RNF5Q99942 180 aa19.39■□□□□ 0.69
HMGA2-208ENST00000537429 BEX1Q9HBH7 125 aa19.39■□□□□ 0.69
HMGA2-208ENST00000537429 PITPNC1Q9UKF7 332 aa19.39■□□□□ 0.69
HMGA2-208ENST00000537429 HPRT1P00492 218 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 RAB25P57735 213 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 OXA1LQ15070 435 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 C11orf88Q6PI97 169 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 OSR1Q8TAX0 266 aaPredicted RBP19.38■□□□□ 0.69
HMGA2-208ENST00000537429 TMEM222Q9H0R3 208 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 PLEKHA2Q9HB19 425 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 ESM1Q9NQ30 184 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 VPREB3Q9UKI3 123 aa19.38■□□□□ 0.69
HMGA2-208ENST00000537429 DNAJC9-AS1A6NH13 148 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 INMT-MINDY4F8WBC2 141 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 VAMP1P23763 118 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 LPAR6P43657 344 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 HILS1P60008 231 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 RPS16P62249 146 aaKnown RBP19.37■□□□□ 0.69
HMGA2-208ENST00000537429 SLC9A3R2Q15599 337 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 HARBI1Q96MB7 349 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 JMJD8Q96S16 334 aa19.37■□□□□ 0.69
HMGA2-208ENST00000537429 C9orf170A2RU37 121 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 SRRM4A7MD48 611 aaKnown RBP19.36■□□□□ 0.69
HMGA2-208ENST00000537429 SHOXO15266 292 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 TCF21O43680 179 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 S1PR2O95136 353 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 SFT2D2O95562 160 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 IFNA2P01563 188 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 SERPINE2P07093 398 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 TMEM187Q14656 261 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 C4orf46Q504U0 113 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 TMEM219Q86XT9 240 aa19.36■□□□□ 0.69
HMGA2-208ENST00000537429 RBM14Q96PK6 669 aaKnown RBP19.36■□□□□ 0.69
HMGA2-208ENST00000537429 NIPBLQ6KC79 2804 aaeCLIP19.36■□□□□ 0.69
HMGA2-208ENST00000537429 ANXA3P12429 323 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 RPA2P15927 270 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 CNTFRP26992 372 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 LGALS7P47929 136 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 F2RL1P55085 397 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 DHRS2Q13268 280 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 LYG2Q86SG7 212 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 CHIAQ9BZP6 476 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 PLSCR3Q9NRY6 295 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 CLDN34H7C241 214 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 OR2F2O95006 317 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 CDS2O95674 445 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 IGKV1-39P01597 117 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 HLA-AP01891 365 aaKnown RBP19.35■□□□□ 0.69
HMGA2-208ENST00000537429 IGKV1D-39P04432 117 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 NPBQ8NG41 125 aa19.35■□□□□ 0.69
HMGA2-208ENST00000537429 OR8H1Q8NGG4 311 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms