RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 GABRA6Q16445 453 aa15.11■□□□□ 0.01
RAB40C-203ENST00000535977 ORAOV1Q8WV07 137 aa15.11■□□□□ 0.01
RAB40C-203ENST00000535977 LSM10Q969L4 123 aaKnown RBP15.11■□□□□ 0.01
RAB40C-203ENST00000535977 ZNF488Q96MN9 340 aa15.11■□□□□ 0.01
RAB40C-203ENST00000535977 SPRR3Q9UBC9 169 aa15.11■□□□□ 0.01
RAB40C-203ENST00000535977 ERRFI1Q9UJM3 462 aaPredicted RBP15.11■□□□□ 0.01
RAB40C-203ENST00000535977 DMXL1Q9Y485 3027 aa15.11■□□□□ 0.01
RAB40C-203ENST00000535977 KBTBD11O94819 623 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 RAC2P15153 192 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 SLC25A24Q6NUK1 477 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 MRGPRGQ86SM5 289 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 PLPPR1Q8TBJ4 325 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 VN1R17PQ8TDU5 208 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 MBD3L1Q8WWY6 194 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 FAM122AQ96E09 287 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 RAB40CQ96S21 281 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 ALKBH7Q9BT30 221 aaPredicted RBP15.1■□□□□ 0.01
RAB40C-203ENST00000535977 DNAJC13O75165 2243 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.1■□□□□ 0.01
RAB40C-203ENST00000535977 OR5G3P0C626 314 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 ERVK11-1P61568 191 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 PPP1CBP62140 327 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 FAM180AQ6UWF9 173 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 CMTM2Q8TAZ6 248 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 MANBALQ9NQG1 85 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 TRAPPC1Q9Y5R8 145 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 ZNF407Q9C0G0 2248 aa15.1■□□□□ 0.01
RAB40C-203ENST00000535977 SH2D1BO14796 132 aa15.09■□□□□ 0.01
RAB40C-203ENST00000535977 CHST1O43916 411 aa15.09■□□□□ 0.01
RAB40C-203ENST00000535977 RPL15P61313 204 aaKnown RBP15.09■□□□□ 0.01
RAB40C-203ENST00000535977 ZNF497Q6ZNH5 498 aa15.09■□□□□ 0.01
RAB40C-203ENST00000535977 LOC105371242A0A075B767 164 aa15.09■□□□□ 0.01
RAB40C-203ENST00000535977 RHBDL1O75783 438 aa15.09■□□□□ 0.01
RAB40C-203ENST00000535977 ATP6V1FQ16864 119 aa15.09■□□□□ 0.01
RAB40C-203ENST00000535977 INO80CQ6PI98 192 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-203ENST00000535977 SMPD2O60906 423 aa15.08■□□□□ 0.01
RAB40C-203ENST00000535977 IL3RAP26951 378 aa15.08■□□□□ 0.01
RAB40C-203ENST00000535977 ZNF146Q15072 292 aa15.08■□□□□ 0.01
RAB40C-203ENST00000535977 Q6ZVH6 145 aa15.08■□□□□ 0.01
RAB40C-203ENST00000535977 SCCPDHQ8NBX0 429 aa15.08■□□□□ 0.01
RAB40C-203ENST00000535977 MED13Q9UHV7 2174 aa15.08■□□□□ 0.01
RAB40C-203ENST00000535977 SRP14P37108 136 aaKnown RBP15.08■□□□□ 0
RAB40C-203ENST00000535977 TMEM41BQ5BJD5 291 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 KNTC1P50748 2209 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 IQCF6A8MYZ5 107 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 ZNF737O75373 536 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 IFNA5P01569 189 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 UBE2V1Q13404 147 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 GPR146Q96CH1 333 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 ANAPC16Q96DE5 110 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 TUBG2Q9NRH3 451 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 TAAR3PQ9P1P4 343 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 TRAPPC2LQ9UL33 140 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 WIPI2Q9Y4P8 454 aa15.08■□□□□ 0
RAB40C-203ENST00000535977 OR2H2O95918 312 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 IFNA1P01562 189 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 RNFT1Q5M7Z0 435 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 MBNL3Q9NUK0 354 aaKnown RBP15.07■□□□□ 0
RAB40C-203ENST00000535977 A0A1W2PN81 502 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 IGHG3P01860 377 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 CHRNA7P36544 502 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 SPATA46Q5T0L3 261 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 HSPB9Q9BQS6 159 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 NCOR1P1Q9H4R4 102 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 LIN7CQ9NUP9 197 aaKnown RBP15.07■□□□□ 0
RAB40C-203ENST00000535977 PXMP4Q9Y6I8 212 aa15.07■□□□□ 0
RAB40C-203ENST00000535977 GRIFINA4D1Z8 144 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 CBY3A6NI87 242 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 RNF212BA8MTL3 300 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 H3BP45 60 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 FAM78BQ5VT40 261 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 PRSS33Q8NF86 280 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 MRGPRDQ8TDS7 321 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 IL1F10Q8WWZ1 152 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 PARLQ9H300 379 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 CLCF1Q9UBD9 225 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 A0A0U1RQK1 487 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 ZNF320A2RRD8 509 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 PSG2P11465 335 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 PAX9P55771 341 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 TPPP2P59282 170 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 MEF2BQ02080 365 aaPredicted RBP15.06■□□□□ 0
RAB40C-203ENST00000535977 TCF15Q12870 199 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 OR8G2PQ6IF36 304 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 KCNIP4Q6PIL6 250 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 CLEC2AQ6UVW9 174 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 OR51H1Q8NH63 302 aa15.06■□□□□ 0
RAB40C-203ENST00000535977 OTOGLQ3ZCN5 2332 aa15.05■□□□□ 0
RAB40C-203ENST00000535977 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.05■□□□□ 0
RAB40C-203ENST00000535977 IGHV1-2P23083 117 aa15.05■□□□□ 0
RAB40C-203ENST00000535977 COMPP49747 757 aaPredicted RBP15.05■□□□□ 0
RAB40C-203ENST00000535977 Q6ZT83 130 aa15.05■□□□□ 0
RAB40C-203ENST00000535977 GPHA2Q96T91 129 aa15.05■□□□□ 0
RAB40C-203ENST00000535977 RBM7Q9Y580 266 aaKnown RBP15.05■□□□□ 0
RAB40C-203ENST00000535977 TRAV39A0A0B4J263 110 aa15.05■□□□□ -0
RAB40C-203ENST00000535977 GYPAP02724 150 aa15.05■□□□□ -0
RAB40C-203ENST00000535977 TMEM267Q0VDI3 215 aaPredicted RBP15.05■□□□□ -0
RAB40C-203ENST00000535977 TESK1Q15569 626 aa15.05■□□□□ -0
RAB40C-203ENST00000535977 FAM214BQ7L5A3 538 aa15.05■□□□□ -0
RAB40C-203ENST00000535977 WDR86Q86TI4 376 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms