RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TIMM9Q9Y5J7 89 aa10.98□□□□□ -0.65
LDLR-203ENST00000535915 A0A1B0GWJ7 208 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 B4DEV8 164 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 TCAPO15273 167 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 IGKV1D-33P01593 117 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 IGKV1-33P01594 117 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 SFTPCP11686 197 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 MZT1Q08AG7 82 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 ATP6V1FQ16864 119 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 C21orf62-AS1Q17RA5 79 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 ZNF674Q2M3X9 581 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 PLPPR2Q96GM1 343 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 TMEM147Q9BVK8 224 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 TGIF2-C20orf24A0A0A6YYL0 155 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 IFITM10A6NMD0 228 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 HMGB3O15347 200 aaKnown RBP10.97□□□□□ -0.65
LDLR-203ENST00000535915 ZNF737O75373 536 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 EGR1P18146 543 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 FGF7P21781 194 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 GAMTQ14353 236 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 P2RY6Q15077 328 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 CYB5R2Q6BCY4 276 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 ACSM6Q6P461 480 aa10.97□□□□□ -0.65
LDLR-203ENST00000535915 MARCH11A6NNE9 402 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 C15orf65H3BRN8 121 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 CGAP01215 116 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 ADH4P08319 380 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 PLA2G5P39877 138 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 PKIAP61925 76 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 PNRC1Q12796 327 aaPredicted RBP10.96□□□□□ -0.65
LDLR-203ENST00000535915 TRAT1Q6PIZ9 186 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 UNQ6494/PRO21346Q6UXR6 183 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 TGIF2LXQ8IUE1 241 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 MISP3Q96FF7 219 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 CIB3Q96Q77 187 aaPredicted RBP10.96□□□□□ -0.65
LDLR-203ENST00000535915 AGMATQ9BSE5 352 aa10.96□□□□□ -0.65
LDLR-203ENST00000535915 CYB5BO43169 146 aa10.96□□□□□ -0.66
LDLR-203ENST00000535915 HTD2P86397 168 aa10.96□□□□□ -0.66
LDLR-203ENST00000535915 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.66
LDLR-203ENST00000535915 LRP11Q86VZ4 500 aa10.96□□□□□ -0.66
LDLR-203ENST00000535915 C1orf174Q8IYL3 243 aa10.96□□□□□ -0.66
LDLR-203ENST00000535915 SLC25A22Q9H936 323 aa10.96□□□□□ -0.66
LDLR-203ENST00000535915 GNG12Q9UBI6 72 aa10.96□□□□□ -0.66
LDLR-203ENST00000535915 SLC25A15Q9Y619 301 aa10.96□□□□□ -0.66
LDLR-203ENST00000535915 ICE1Q9Y2F5 2266 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 PMS2P5A8MQ11 134 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 GPR12P47775 334 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 ZNF83P51522 516 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 RAB4BP61018 213 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 PDZD11Q5EBL8 140 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 R3HDM4Q96D70 268 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 DOK5Q9P104 306 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 IGKV1D-17A0A075B6S4 117 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 IFNA10P01566 189 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 TFF3Q07654 80 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 NCR3LG1Q68D85 454 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 OR10G9Q8NGN4 311 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 OR10G7Q8NGN6 311 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 MRPL37Q9BZE1 423 aaKnown RBP10.95□□□□□ -0.66
LDLR-203ENST00000535915 SDF2L1Q9HCN8 221 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
LDLR-203ENST00000535915 TET2Q6N021 2002 aaPredicted RBP10.95□□□□□ -0.66
LDLR-203ENST00000535915 IGHV3OR15-7A0A075B7D8 119 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 SRRM5B3KS81 715 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 CYB5R3P00387 301 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 MSMPQ1L6U9 139 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 LBHQ53QV2 105 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 FFAR4Q5NUL3 377 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 SEM1Q6ZVN7 128 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 ZADH2Q8N4Q0 377 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 ZNF709Q8N972 641 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 NEU1Q99519 415 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 DSCAMO60469 2012 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 M0R1B8 84 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 FCGR3BO75015 233 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 MBP02144 154 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 GZMHP20718 246 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 MEF2BQ02080 365 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 TLE1Q04724 770 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 C2orf88Q9BSF0 95 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 QTRT1Q9BXR0 403 aaKnown RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 NPCDR1Q9BY65 106 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 FAM234AQ9H0X4 552 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 DSCAML1Q8TD84 2053 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 TANC2Q9HCD6 1990 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 CTXND1A0A1B0GTU2 59 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 MBD3L4A6NDZ8 208 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 MBD3L3A6NE82 208 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 MBD3L5A6NJ08 208 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 CLDN34H7C241 214 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 IGHV3-13P01766 116 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 IGHV3-7P01780 117 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 DUTP33316 252 aaKnown RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 PAX5Q02548 391 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 VHLLQ6RSH7 139 aa10.94□□□□□ -0.66
LDLR-203ENST00000535915 MBD3L2Q8NHZ7 208 aaPredicted RBP10.94□□□□□ -0.66
LDLR-203ENST00000535915 SEC14L6B5MCN3 397 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 MGST3O14880 152 aa10.93□□□□□ -0.66
LDLR-203ENST00000535915 OR9G9P0C7N8 305 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms