RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 GNB3P16520 340 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 CHRNA7P36544 502 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 SCAND1P57086 179 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 RAB25P57735 213 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 RPS16P62249 146 aaKnown RBP8.35□□□□□ -1.07
CCDC60-202ENST00000535685 GNB1P62873 340 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 PLGLAQ15195 96 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 ECSCRQ19T08 205 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 TMEM177Q53S58 311 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 ACTBL2Q562R1 376 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 IGSF11Q5DX21 431 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 C22orf42Q6IC83 251 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 ZNF429Q86V71 674 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 PPP1R27Q86WC6 154 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 H1FOOQ8IZA3 346 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-202ENST00000535685 DRAXINQ8NBI3 349 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-202ENST00000535685 ADTRPQ96IZ2 230 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 DCSTAMPQ9H295 470 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 SLC35D1Q9NTN3 355 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 TXNL4BQ9NX01 149 aaKnown RBP8.35□□□□□ -1.07
CCDC60-202ENST00000535685 SDHAF2Q9NX18 166 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 STUB1Q9UNE7 303 aa8.35□□□□□ -1.07
CCDC60-202ENST00000535685 CA2P00918 260 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 CTXN2P0C2S0 81 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 OR8U9P0C7N5 309 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-202ENST00000535685 LINC00205P59089 165 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 SSBP2P81877 361 aaPredicted RBP8.34□□□□□ -1.07
CCDC60-202ENST00000535685 PITPNAQ00169 270 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 ZNF260Q3ZCT1 412 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 UNQ5815/PRO19632Q6UWF5 114 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 LFNGQ8NES3 379 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 DDB2Q92466 427 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 DCUN1D4Q92564 292 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 ARPC1AQ92747 370 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 C5orf30Q96GV9 206 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 OR2D2Q9H210 308 aa8.34□□□□□ -1.07
CCDC60-202ENST00000535685 A0A0B4J203 849 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 LINC01619G3V211 115 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 OVOL1O14753 267 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 BET1O15155 118 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 SLC25A17O43808 307 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 TMEM127O75204 238 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 HSPB1P04792 205 aaKnown RBP8.33□□□□□ -1.08
CCDC60-202ENST00000535685 PSMB9P28065 219 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 CD40LGP29965 261 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 TALDO1P37837 337 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 RPL11P62913 178 aaKnown RBP8.33□□□□□ -1.08
CCDC60-202ENST00000535685 CD69Q07108 199 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 ARFRP1Q13795 201 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 FXYD3Q14802 87 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 CDNFQ49AH0 187 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 HACD4Q5VWC8 232 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 ZNF773Q6PK81 442 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 TEX45Q8NA69 505 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 MISP3Q96FF7 219 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 GINS4Q9BRT9 223 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 ATG5Q9H1Y0 275 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 ZNF230Q9UIE0 474 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-202ENST00000535685 SSR3Q9UNL2 185 aa8.33□□□□□ -1.08
CCDC60-202ENST00000535685 ZNF256Q9Y2P7 627 aaPredicted RBP8.33□□□□□ -1.08
CCDC60-202ENST00000535685 IGKV1D-8A0A087WSZ0 117 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 SLC22A5O76082 557 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 HLA-DQB1P01920 261 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 DUTP33316 252 aaKnown RBP8.32□□□□□ -1.08
CCDC60-202ENST00000535685 CBX3Q13185 183 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 RTL8BQ17RB0 113 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 MRGPRG-AS1Q2M3A8 158 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 ACSM6Q6P461 480 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 SFXN4Q6P4A7 337 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 CNIH2Q6PI25 160 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 POC5Q8NA72 575 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 OSR1Q8TAX0 266 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-202ENST00000535685 ABHD5Q8WTS1 349 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 DLX4Q92988 240 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-202ENST00000535685 HARBI1Q96MB7 349 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 CLCC1Q96S66 551 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 FAM103A1Q9BTL3 118 aaKnown RBP8.32□□□□□ -1.08
CCDC60-202ENST00000535685 FBXL7Q9UJT9 491 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 OR2W1Q9Y3N9 320 aa8.32□□□□□ -1.08
CCDC60-202ENST00000535685 A0A075B6Q4 140 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 IGHV4OR15-8A0A075B7B6 117 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 A0A087WW49 117 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 A0A0A6YYH2 397 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 A0A0G2JLM5 398 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 A6NJ64 397 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 SRRM4A7MD48 611 aaKnown RBP8.31□□□□□ -1.08
CCDC60-202ENST00000535685 UBE2KP61086 200 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 KCTD21Q4G0X4 260 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 C11orf87Q6NUJ2 197 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 ZNF645Q8N7E2 425 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 MAFIPQ8WZ33 124 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 OR5B12Q96R08 314 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 PRR25Q96S07 402 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 ALX4Q9H161 411 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-202ENST00000535685 ELF5Q9UKW6 265 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-202ENST00000535685 A3GALT2U3KPV4 340 aa8.31□□□□□ -1.08
CCDC60-202ENST00000535685 NBEAL2Q6ZNJ1 2754 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 LINC00473A8K010 186 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 TUSC2O75896 110 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms