RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 IDNKQ5T6J7 187 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 LINC01590Q5TEZ4 76 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 LIPKQ5VXJ0 399 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 GGNBP1Q5YKI7 109 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 SIGIRRQ6IA17 410 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 C22orf42Q6IC83 251 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR52W1Q6IF63 320 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 LAIR2Q6ISS4 152 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC25A26Q70HW3 274 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 NRARPQ7Z6K4 114 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF573Q86YE8 665 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 GVQW1Q8N7I0 195 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 TCEANCQ8N8B7 351 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 PRR26Q8N8Z3 221 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR5T1Q8NG75 326 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR8H1Q8NGG4 311 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR4D6Q8NGJ1 314 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR4C15Q8NGM1 316 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR13A1Q8NGR1 328 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR6K6Q8NGW6 343 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR2T10Q8NGZ9 312 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR9G1Q8NH87 305 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 TEX47Q8TBZ9 253 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 FANK1Q8TC84 345 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 THEM6Q8WUY1 208 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 PCNPQ8WW12 178 aaKnown RBP2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 APH1BQ8WW43 257 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 CORO2AQ92828 525 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 UFD1Q92890 307 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 EMG1Q92979 244 aaKnown RBP2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 COQ2Q96H96 371 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 TMEM80Q96HE8 168 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 DIRAS2Q96HU8 199 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 FEVQ99581 238 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 TBX5Q99593 518 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 NIPSNAP1Q9BPW8 284 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 BCL7BQ9BQE9 202 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM103A1Q9BTL3 118 aaKnown RBP2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 MND1Q9BWT6 205 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 SCRT1Q9BWW7 348 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 GON7Q9BXV9 100 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 TTTY10Q9BZA0 68 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 SLIRPQ9GZT3 109 aaKnown RBP2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 GORASP2Q9H8Y8 452 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 MAP6D1Q9H9H5 199 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 IL1RAPQ9NPH3 570 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 GPR84Q9NQS5 396 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 OR6C3Q9NZP0 311 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 ENOPH1Q9UHY7 261 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 PSORS1C1Q9UIG5 152 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 GAB2Q9UQC2 676 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 ALG5Q9Y673 324 aa2.18□□□□□ -2.06
CHMP4A-208ENST00000534106 MUC2Q02817 5179 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TRAV6A0A075B6T7 132 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 IGHV3-43A0A0B4J1X8 118 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 IGKV1-12A0A0C4DH73 117 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 A0A1B0GTI1 187 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 KBTBD11-OT1A0A1B0GTJ5 212 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 A0A1W2PN81 502 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 ODAMA1E959 279 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR5B21A6NL26 309 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CTDSP2O14595 271 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SSNA1O43805 119 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 ORC5O43913 435 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MPZL2O60487 215 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SELENOFO60613 162 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 HPGDSO60760 199 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 WBP4O75554 376 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GPX5O75715 221 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR2C1O95371 312 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CRYZL1O95825 349 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR2H2O95918 312 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 IGKV1D-12P01611 117 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GAPDHP04406 335 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 H1F0P07305 194 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MRPL3P09001 348 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 RBMY1CP0DJD4 496 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 IGHV3-43DP0DP04 118 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 PRKACAP17612 351 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SPI1P17947 270 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CFL1P23528 166 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MPZP25189 248 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 ERP29P30040 261 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 HTR1FP30939 366 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC6A6P31641 620 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 FCGR2BP31994 310 aaPredicted RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 FUSP35637 526 aaKnown RBP eCLIP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CHRNA7P36544 502 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TALDO1P37837 337 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 PTGFRP43088 359 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 KIR3DL2P43630 455 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MRPL19P49406 292 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CAMPP49913 170 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CRISP1P54107 249 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TPPP2P59282 170 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GNG2P59768 71 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 RAB40BQ12829 278 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CRMP1Q14194 572 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GINS1Q14691 196 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms