RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CXorf66Q5JRM2 361 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 LINC01590Q5TEZ4 76 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 MBD3L2Q8NHZ7 208 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 SPOCK3Q9BQ16 436 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 ATG101Q9BSB4 218 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 TMEM167BQ9NRX6 74 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 TRBV5-7A0A0A0MS05 114 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 SIGLEC5O15389 551 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 ANK1P16157 1881 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 CDX1P47902 265 aaPredicted RBP9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 LOXL3P58215 753 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 POC1AQ8NBT0 407 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 DCTN5Q9BTE1 182 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 TLNRD1Q9H1K6 362 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 NAGKQ9UJ70 344 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 AUP1Q9Y679 476 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 ACACAQ13085 2346 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 PGA5P0DJD9 388 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 FAM106AQ4KMX7 169 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 VAX1Q5SQQ9 334 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF645Q8N7E2 425 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 STPG3Q8N7X2 389 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 PRR13Q9NZ81 148 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 RCC2Q9P258 522 aaKnown RBP9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 METTL1Q9UBP6 276 aaKnown RBP9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 OR51B2Q9Y5P1 312 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 RP1P56715 2156 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 hCG_38984A0A1B0GV85 526 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 KLF4O43474 513 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 DEDDO75618 318 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 OR4C13Q8NGP0 309 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 OR4C12Q96R67 309 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 ASCL3Q9NQ33 180 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 TECRQ9NZ01 308 aaKnown RBP9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 CHD5Q8TDI0 1954 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 GVINP1Q7Z2Y8 2422 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 NCOR1O75376 2440 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 TMEM255AQ5JRV8 349 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 G6PC2Q9NQR9 355 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 DPM3Q9P2X0 92 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
AMBRA1-211ENST00000533727 DNAJC13O75165 2243 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 HIST1H1BP16401 226 aaKnown RBP9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 TCF15Q12870 199 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 UNQ5815/PRO19632Q6UWF5 114 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 AMELYQ99218 206 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 FAM186AA6NE01 2351 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 TRAV30A0A087WSZ9 112 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 SNURFLB1AK76 121 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 SNCGO76070 127 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 EFNA4P52798 201 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 TCL1AP56279 114 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 ATP5IP56385 69 aaPredicted RBP9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 EWSR1Q01844 656 aaKnown RBP eCLIP9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 LEMD1Q68G75 181 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF343Q6P1L6 599 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 OR8I2Q8N0Y5 310 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 AQP3Q92482 292 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 GPR61Q9BZJ8 451 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 KCNK15Q9H427 330 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 C7orf69Q9H7B7 122 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF716A6NP11 495 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 RAMP1O60894 148 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 PF4P02776 101 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 HIST1H1EP10412 219 aaKnown RBP9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 NHLRC3Q5JS37 347 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 PNKDQ8N490 385 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 P2RX4Q99571 388 aa9.6□□□□□ -0.87
AMBRA1-211ENST00000533727 GAGE10A6NGK3 116 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 SLC25A5P05141 298 aaKnown RBP9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 REG1BP48304 166 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 RPL8P62917 257 aaKnown RBP9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 REPIN1Q9BWE0 567 aaKnown RBP9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 DOK5Q9P104 306 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 IFITM10A6NMD0 228 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 ACP7Q6ZNF0 438 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 RBPMS2Q6ZRY4 209 aaKnown RBP9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 SLC35E3Q7Z769 313 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 CENPVQ7Z7K6 275 aaPredicted RBP9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 MRPL30Q8TCC3 161 aaKnown RBP9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 RHBDL1O75783 438 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 C1QCP02747 245 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 ATP6V0CP27449 155 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 IER3P46695 156 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 SELENOTP62341 195 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 WDR31Q8NA23 367 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 PINLYPA6NC86 204 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 H0Y980 276 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 NPIPB7O75200 414 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 PRSS1P07477 247 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 CSN3P07498 182 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 VSIG10L2P0DP72 767 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 UNQ9370/PRO34162Q6UXP9 181 aa9.59□□□□□ -0.87
AMBRA1-211ENST00000533727 EIF4E3Q8N5X7 224 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms