RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 IQCJQ1A5X6 159 aa13.88□□□□□ -0.19
CTSB-228ENST00000533455 DCAF10Q5QP82 559 aa13.88□□□□□ -0.19
CTSB-228ENST00000533455 BTNL3Q6UXE8 466 aa13.88□□□□□ -0.19
CTSB-228ENST00000533455 TMEM105Q8N8V8 129 aa13.88□□□□□ -0.19
CTSB-228ENST00000533455 HSD17B10Q99714 261 aaKnown RBP13.88□□□□□ -0.19
CTSB-228ENST00000533455 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
CTSB-228ENST00000533455 KLF13Q9Y2Y9 288 aaPredicted RBP13.88□□□□□ -0.19
CTSB-228ENST00000533455 C9orf172C9J069 976 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 SP1P08047 785 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 CD82P27701 267 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 AESQ08117 197 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 FOXL1Q12952 345 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 LINC00696Q6ZRV3 163 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 TXNDC17Q9BRA2 123 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 FRYLO94915 3013 aa13.87□□□□□ -0.19
CTSB-228ENST00000533455 LINC00473A8K010 186 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 MPDU1O75352 247 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 DEFA4P12838 97 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 ATP5G3P48201 142 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 PSG7Q13046 419 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 PRSS8Q16651 343 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 MRPL41Q8IXM3 137 aaKnown RBP13.86□□□□□ -0.19
CTSB-228ENST00000533455 C11orf53Q8IXP5 236 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 MDS2Q8NDY4 140 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 PXMP4Q9Y6I8 212 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 MARCH11A6NNE9 402 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 FAM90A9PA6NNJ1 464 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 SNRPCP09234 159 aaKnown RBP13.86□□□□□ -0.19
CTSB-228ENST00000533455 SELLP14151 372 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 CD1BP29016 333 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 VASH2Q86V25 355 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 MRGPRDQ8TDS7 321 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 LURAP1Q96LR2 239 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 QTRT1Q9BXR0 403 aaKnown RBP13.86□□□□□ -0.19
CTSB-228ENST00000533455 WDFY4Q6ZS81 3184 aa13.86□□□□□ -0.19
CTSB-228ENST00000533455 IGHV3-64DA0A0J9YX35 117 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 C21orf140B9A014 251 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 KLRC4-KLRK1H3BQV0 150 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 WNT9BO14905 357 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 RBMXL2O75526 392 aaKnown RBP13.85□□□□□ -0.19
CTSB-228ENST00000533455 PDGFBP01127 241 aaPredicted RBP13.85□□□□□ -0.19
CTSB-228ENST00000533455 CRYAAP02489 173 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 RAB4BP61018 213 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 TRIP6Q15654 476 aaKnown RBP13.85□□□□□ -0.19
CTSB-228ENST00000533455 SPINK9Q5DT21 86 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 ACP7Q6ZNF0 438 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 Q6ZR03 302 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 OR5T1Q8NG75 326 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 TRAPPC1Q9Y5R8 145 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.85□□□□□ -0.19
CTSB-228ENST00000533455 A0A0U1RQK1 487 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 ZNF320A2RRD8 509 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 GALR2O43603 387 aaPredicted RBP13.85□□□□□ -0.19
CTSB-228ENST00000533455 OR4A8P0C604 315 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 SPCS3P61009 180 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 PAX5Q02548 391 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 R3HDM4Q96D70 268 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 FOXJ2Q9P0K8 574 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 WASF3Q9UPY6 502 aa13.85□□□□□ -0.19
CTSB-228ENST00000533455 TRAV38-1A0A0B4J264 116 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 TNFSF15O95150 251 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 NDUFB4O95168 129 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 OR9G9P0C7N8 305 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 MPV17P39210 176 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 OPRK1P41145 380 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 GABRA2P47869 451 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 UBE2NP61088 152 aaKnown RBP13.84□□□□□ -0.19
CTSB-228ENST00000533455 GCSAMLQ5JQS6 135 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 ELOVL5Q9NYP7 299 aa13.84□□□□□ -0.19
CTSB-228ENST00000533455 A0A1W2PPV4 95 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 IFNL4K9M1U5 179 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 C1QTNF9P0C862 333 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 EGR1P18146 543 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 UBE2G2P60604 165 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 RPP30P78346 268 aaKnown RBP13.83□□□□□ -0.2
CTSB-228ENST00000533455 CST9LP1Q5W188 147 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 ZNF826PQ6ZT77 177 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 ZNF114Q8NC26 417 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 OR13A1Q8NGR1 328 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 SFRP2Q96HF1 295 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 DERL1Q9BUN8 251 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 CXXC4Q9H2H0 198 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 OBP2BQ9NPH6 170 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 FKBP11Q9NYL4 201 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 SPRR3Q9UBC9 169 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 LAMTOR5O43504 91 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 STAG3L2P0CL84 134 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 STAG3L3P0CL85 134 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 FOSL1P15407 271 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 IGHV1-2P23083 117 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 SSTR5P35346 364 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 YPEL3P61236 119 aaPredicted RBP13.83□□□□□ -0.2
CTSB-228ENST00000533455 HTD2P86397 168 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 USF2Q15853 346 aaPredicted RBP13.83□□□□□ -0.2
CTSB-228ENST00000533455 TRAT1Q6PIZ9 186 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 KLF14Q8TD94 323 aaPredicted RBP13.83□□□□□ -0.2
CTSB-228ENST00000533455 GMPPAQ96IJ6 420 aaPredicted RBP13.83□□□□□ -0.2
CTSB-228ENST00000533455 PSG11Q9UQ72 335 aa13.83□□□□□ -0.2
CTSB-228ENST00000533455 KIR2DL5BA0A0G2JN68 375 aa13.82□□□□□ -0.2
CTSB-228ENST00000533455 KIR2DL5BA0A0G2JPC4 375 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms