RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-215	ENST00000533440	MRPS18A	Q9NVS2	196 aa	Known RBP	5.75	□□□□□ -1.49
NXF1-215	ENST00000533440	OR1A1	Q9P1Q5	309 aa		5.75	□□□□□ -1.49
NXF1-215	ENST00000533440	AASS	Q9UDR5	926 aa		5.75	□□□□□ -1.49
NXF1-215	ENST00000533440	EXOSC1	Q9Y3B2	195 aa	Known RBP	5.75	□□□□□ -1.49
NXF1-215	ENST00000533440	TRBV6-6	A0A0A6YYG2	114 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	PRSS29P	A6NIE9	313 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	RTL8C	O15255	209 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	OGG1	O15527	345 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	OR2J3	O76001	311 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	ZBTB25	P24278	435 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	RPS11	P62280	158 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	PRSS8	Q16651	343 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440		Q499Y3	187 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	FAM106A	Q4KMX7	169 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	OR4A47	Q6IF82	309 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	MOB1B	Q7L9L4	216 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	C6orf201	Q7Z4U5	140 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	TEX45	Q8NA69	505 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	OR52I1	Q8NGK6	324 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	FBLIM1	Q8WUP2	373 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	SMIM19	Q96E16	107 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	NEDD4L	Q96PU5	975 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	C11orf68	Q9H3H3	251 aa	Known RBP	5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	MAP6D1	Q9H9H5	199 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	AMBN	Q9NP70	447 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	CKLF	Q9UBR5	152 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	GHRL	Q9UBU3	117 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	FBXL17	Q9UF56	701 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	ZNF221	Q9UK13	617 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	OAZ3	Q9UMX2	235 aa		5.74	□□□□□ -1.49
NXF1-215	ENST00000533440	TRBV5-7	A0A0A0MS05	114 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440		M0R1X1	148 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	SHOX	O15266	292 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	MPPED1	O15442	326 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	XRCC3	O43542	346 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	FCGR2B	P31994	310 aa	Predicted RBP	5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	ARL3	P36405	182 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	UBE2K	P61086	200 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	GNGT1	P63211	74 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	HLA-DRB3	P79483	266 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	TAGLN	Q01995	201 aa	Known RBP	5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	TNXA	Q16473	311 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	ODF3L2	Q3SX64	289 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	DNAL1	Q4LDG9	190 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	GLT8D1	Q68CQ7	371 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	SLC38A6	Q8IZM9	456 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	RHOXF1	Q8NHV9	184 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	MARC2	Q969Z3	335 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	GALNT14	Q96FL9	552 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	CCDC140	Q96MF4	163 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	SPAG8	Q99932	426 aa	Predicted RBP	5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	UQCC2	Q9BRT2	126 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	UBQLN2	Q9UHD9	624 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	AP4S1	Q9Y587	144 aa		5.73	□□□□□ -1.49
NXF1-215	ENST00000533440	IGKV1-6	A0A0C4DH72	117 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	ZNF320	A2RRD8	509 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	IGLL5	B9A064	214 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	TSPAN4	O14817	238 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	GYG2	O15488	501 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	S1PR2	O95136	353 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	LALBA	P00709	142 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	ALPL	P05186	524 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	SCT	P09683	121 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	FCGR1A	P12314	374 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	HTR2C	P28335	458 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	MFAP2	P55001	183 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	RPS27A	P62979	156 aa	Known RBP	5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	KLK9	Q2XQG4	91 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	VMA21	Q3ZAQ7	101 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	YIF1B	Q5BJH7	314 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	OR2G6	Q5TZ20	316 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	IDO2	Q6ZQW0	420 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	SLC25A42	Q86VD7	318 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	SETD6	Q8TBK2	473 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	ACOT12	Q8WYK0	555 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	CENPN	Q96H22	339 aa	Predicted RBP	5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	PGLYRP3	Q96LB9	341 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440		Q96MT0	163 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	FANCD2OS	Q96PS1	177 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	SPIN2A	Q99865	258 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	RARRES2	Q99969	163 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	SPIN2B	Q9BPZ2	258 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	TM2D1	Q9BX74	207 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	RIMS4	Q9H426	269 aa	Predicted RBP	5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	C5orf66	Q9H5L9	145 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	FGF20	Q9NP95	211 aa	Predicted RBP	5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	SDHAF2	Q9NX18	166 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	BABAM2	Q9NXR7	383 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	RDH8	Q9NYR8	311 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	MRPL27	Q9P0M9	148 aa	Known RBP	5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	KLK9	Q9UKQ9	250 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	MGAT4A	Q9UM21	535 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440	ZNF257	Q9Y2Q1	563 aa		5.72	□□□□□ -1.49
NXF1-215	ENST00000533440		A0A1W2PPK0	400 aa		5.71	□□□□□ -1.5
NXF1-215	ENST00000533440	SAC3D1	A6NKF1	404 aa		5.71	□□□□□ -1.5
NXF1-215	ENST00000533440	TEX22	C9J3V5	150 aa		5.71	□□□□□ -1.5

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