RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 KANTRA0A1W2PQU2 76 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 SLC31A2O15432 143 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 DLX6P56179 175 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 IZUMO4Q1ZYL8 232 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 Q3ZCU0 254 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 LINC00574Q9H8X3 128 aa15.13■□□□□ 0.01
SMPD1-208ENST00000533123 ITPR3Q14573 2671 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 YPEL1O60688 119 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 RAMP3O60896 148 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 NXPH3O95157 252 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 NFYBP25208 207 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 YPEL2Q96QA6 119 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 MMP26Q9NRE1 261 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 IDI2-AS1Q9NZ38 188 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 A0A096LNT2 108 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 A0A1W2PPE3 182 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 DUXBA0A1W2PPF3 345 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 RNF223E7ERA6 249 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 LIPFP07098 398 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 EPHA1P21709 976 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
SMPD1-208ENST00000533123 C11orf42Q8N5U0 333 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 ZBTB34Q8NCN2 500 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 MAPK1IP1LQ8NDC0 245 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 EDARADDQ8WWZ3 215 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 ONECUT1Q9UBC0 465 aa15.12■□□□□ 0.01
SMPD1-208ENST00000533123 SMCO1Q147U7 214 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 FAM74A1Q5RGS3 127 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 HEPN1Q6WQI6 88 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 CLRN3Q8NCR9 226 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 AQP10Q96PS8 301 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 RAB9BQ9NP90 201 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 GFOD1Q9NXC2 390 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 LINC00473A8K010 186 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 RNF212BA8MTL3 300 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 PROP1O75360 226 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 FOXH1O75593 365 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 IGKV1-5P01602 117 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 GPR12P47775 334 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 DLX1P56177 255 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 BRWD1-AS2P59051 145 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 ARF6P62330 175 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 CXorf66Q5JRM2 361 aaPredicted RBP15.11■□□□□ 0.01
SMPD1-208ENST00000533123 WFDC11Q8NEX6 87 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 TCTEX1D2Q8WW35 142 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 GPR146Q96CH1 333 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 IFI27L2Q9H2X8 130 aa15.11■□□□□ 0.01
SMPD1-208ENST00000533123 RCL1Q9Y2P8 373 aaKnown RBP15.11■□□□□ 0.01
SMPD1-208ENST00000533123 AKAP9Q99996 3911 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 A0A1W2PPH5 198 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 FAM74A7A6NL05 159 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 ST8SIA3O43173 380 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 HKR1P10072 659 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 PAX2Q02962 417 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 FAM74A3Q4VXF1 159 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 SPIN2AQ99865 258 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 SPIN2BQ9BPZ2 258 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 ZNF471Q9BX82 626 aaPredicted RBP15.1■□□□□ 0.01
SMPD1-208ENST00000533123 MYO9AB2RTY4 2548 aa15.1■□□□□ 0.01
SMPD1-208ENST00000533123 C17orf98A8MV24 154 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 PRB3Q04118 309 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-208ENST00000533123 RPL39P5Q59GN2 51 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 Q6ZRM9 215 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 RNASE11Q8TAA1 199 aaKnown RBP15.09■□□□□ 0.01
SMPD1-208ENST00000533123 MAGT1Q9H0U3 335 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 POMT1Q9Y6A1 747 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 ENSAO43768 121 aaKnown RBP15.09■□□□□ 0.01
SMPD1-208ENST00000533123 LPAR6P43657 344 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 AKR1C2P52895 323 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 POLR2GP62487 172 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMPD1-208ENST00000533123 DEFA5Q01523 94 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 ZNF816Q0VGE8 651 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-208ENST00000533123 MSMO1Q15800 293 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 CT45A1Q5HYN5 189 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 LINC00518Q8N0U6 118 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 DMBX1Q8NFW5 382 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 CT45A3Q8NHU0 189 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 FOXC2Q99958 501 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 ABHD14AQ9BUJ0 271 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 CELSR1Q9NYQ6 3014 aa15.09■□□□□ 0.01
SMPD1-208ENST00000533123 IGHV2-70DA0A0C4DH43 119 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 IGHV1-8P0DP01 117 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 NKX2-1P43699 371 aaPredicted RBP15.08■□□□□ 0
SMPD1-208ENST00000533123 GNG10P50151 68 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 CLEC9AQ6UXN8 241 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 C1orf229Q6ZS94 237 aaPredicted RBP15.08■□□□□ 0
SMPD1-208ENST00000533123 BPIFCQ8NFQ6 507 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.08■□□□□ 0
SMPD1-208ENST00000533123 RPL12P30050 165 aaKnown RBP15.08■□□□□ 0
SMPD1-208ENST00000533123 CATR1Q13166 79 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 SPAG16Q8N0X2 631 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 Q8N7P7 452 aa15.08■□□□□ 0
SMPD1-208ENST00000533123 E5RGE8 158 aa15.07■□□□□ 0
SMPD1-208ENST00000533123 SSSCA1O60232 199 aa15.07■□□□□ 0
SMPD1-208ENST00000533123 S1PR2O95136 353 aa15.07■□□□□ 0
SMPD1-208ENST00000533123 ARHGDIBP52566 201 aa15.07■□□□□ 0
SMPD1-208ENST00000533123 LOXL1Q08397 574 aaPredicted RBP15.07■□□□□ 0
SMPD1-208ENST00000533123 OR10A7Q8NGE5 316 aa15.07■□□□□ 0
SMPD1-208ENST00000533123 NKX6-2Q9C056 277 aaPredicted RBP15.07■□□□□ 0
SMPD1-208ENST00000533123 CYTL1Q9NRR1 136 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms