RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 P2RX4Q99571 388 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 MMDQ15546 238 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 KLHDC1Q8N7A1 406 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 RNF126Q9BV68 326 aa13.01□□□□□ -0.33
PCDHA3-202ENST00000532566 OR10J1P30954 320 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 KHDC1LQ5JSQ8 128 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 ZNF596Q8TC21 504 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 RASL11BQ9BPW5 248 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 ASCL3Q9NQ33 180 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 FUT9Q9Y231 359 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 IGKV3D-15A0A087WSY6 115 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 CAMPP49913 170 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 RANP62826 216 aaKnown RBP13□□□□□ -0.33
PCDHA3-202ENST00000532566 FGFBP3Q8TAT2 258 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 RPL27AP46776 148 aaKnown RBP13□□□□□ -0.33
PCDHA3-202ENST00000532566 RPL8P62917 257 aaKnown RBP13□□□□□ -0.33
PCDHA3-202ENST00000532566 ZNRF1Q8ND25 227 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 RARRES2Q99969 163 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 TCF19Q9Y242 345 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 FANCMQ8IYD8 2048 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 PSMG3Q9BT73 122 aaPredicted RBP13□□□□□ -0.33
PCDHA3-202ENST00000532566 VAMP8Q9BV40 100 aa13□□□□□ -0.33
PCDHA3-202ENST00000532566 NDUFA2O43678 99 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 APELAP0DMC3 54 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 ZNF385CQ66K41 422 aaPredicted RBP12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 LEAP2Q969E1 77 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 CELA3BP08861 270 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 DOLPP1Q86YN1 238 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 PRR7Q8TB68 274 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 MEGF10Q96KG7 1140 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 TMEM204Q9BSN7 226 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 PITPNC1Q9UKF7 332 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 TICRRQ7Z2Z1 1910 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 ZNF98A6NK75 572 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 MIC13Q5XKP0 118 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 RPRMQ9NS64 109 aa12.99□□□□□ -0.33
PCDHA3-202ENST00000532566 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 IGKV1D-8A0A087WSZ0 117 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 TRAV20A0A0B4J274 112 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 IQCF6A8MYZ5 107 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 H0YIZ8 118 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 NDUFB4O95168 129 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 DHRS7BQ6IAN0 325 aaPredicted RBP12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 CISD1Q9NZ45 108 aaKnown RBP12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 CD59P13987 128 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 AMTP48728 403 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 BMPERQ8N8U9 685 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 PTBP3O95758 552 aaKnown RBP12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 SMUG1Q53HV7 270 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 RNASEKQ6P5S7 137 aaKnown RBP12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 GTF3AQ92664 365 aaKnown RBP12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 PACRGQ96M98 296 aaPredicted RBP12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 WASHC3Q9Y3C0 194 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 ARL2-SNX15V9GYD0 113 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 DOCK7Q96N67 2140 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 IGHV2OR16-5A0A0B4J2B6 119 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 CEACAM18A8MTB9 384 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 ZNF253O75346 499 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 SELENOTP62341 195 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 ACSF3Q4G176 576 aaPredicted RBP12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 FAM216AQ8WUB2 273 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 TMEM56-RWDD3S4R434 201 aa12.98□□□□□ -0.33
PCDHA3-202ENST00000532566 ZNF407Q9C0G0 2248 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 EIF4E3Q8N5X7 224 aaKnown RBP12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 C9orf106Q8NAJ2 232 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 PNRC2Q9NPJ4 139 aaKnown RBP12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 TRBV6-7A0A0A0MS04 114 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 IGHV3-72A0A0B4J1Y9 119 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 IGKV1-12A0A0C4DH73 117 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 IGKV1D-12P01611 117 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 LGALS7P47929 136 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 LHFPL1Q86WI0 220 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 CARHSP1Q9Y2V2 147 aaKnown RBP12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 PLXND1Q9Y4D7 1925 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 PAX6P26367 422 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 PQLC2Q6ZP29 291 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 MMD2Q8IY49 270 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
PCDHA3-202ENST00000532566 CCKARP32238 428 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 WNT5AP41221 380 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 PRO1933Q9H354 126 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 COA4Q9NYJ1 87 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 KCNMB2Q9Y691 235 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 IGKV1D-13A0A0B4J2D9 117 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 KBTBD11O94819 623 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 LINC00869P0C866 280 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 IGKV1-13P0DP09 117 aa12.96□□□□□ -0.33
PCDHA3-202ENST00000532566 HTR1DP28221 377 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms