RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 Q6ZS49 121 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 TMPPEQ6ZT21 453 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 SCXQ7RTU7 201 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 C1orf174Q8IYL3 243 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 RPRMLQ8N4K4 120 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 OR13C8Q8NGS7 320 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 OR4A5Q8NH83 315 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 MAL2Q969L2 176 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 NMNAT3Q96T66 252 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 ACER3Q9NUN7 267 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 RPS6KB2Q9UBS0 482 aa2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.95
AC055878.1-201ENST00000531858 DHX57Q6P158 1386 aaKnown RBP2.84□□□□□ -1.96
AC055878.1-201ENST00000531858 SIGLEC16A6NMB1 481 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 H7C1C5 153 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 COX7A2LO14548 114 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 PIAS1O75925 651 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 NDUFC2O95298 119 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 NRASP01111 189 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 HRASP01112 189 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 KRASP01116 189 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 PPBPP02775 128 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 ZNF806P0C7X5 589 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 ZNF32P17041 273 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 ELK1P19419 428 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 LCN6P62502 163 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 PDGFRLQ15198 375 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 DEFB115Q30KQ5 88 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 Q6ZTC4 211 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 MIR7-3HGQ8N6C7 128 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 MRPL30Q8TCC3 161 aaKnown RBP2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 ZNF721Q8TF20 911 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 C11orf40Q8WZ69 217 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 MALSU1Q96EH3 234 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 L3HYPDHQ96EM0 354 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 CCDC90BQ9GZT6 254 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 CHST6Q9GZX3 395 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 PBOV1Q9GZY1 135 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 RNF122Q9H9V4 155 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 RPUSD1Q9UJJ7 312 aaKnown RBP2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 SSR3Q9UNL2 185 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 ERGIC3Q9Y282 383 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 COQ4Q9Y3A0 265 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 TRAPPC1Q9Y5R8 145 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 TNS2Q63HR2 1409 aa2.83□□□□□ -1.96
AC055878.1-201ENST00000531858 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 IGSF23A1L1A6 192 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 MAP1LC3B2A6NCE7 125 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 E7EQ34 232 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 TMX2-CTNND1H3BSU7 103 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 LST1O00453 97 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 KPNA4O00629 521 aaPredicted RBP2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 BET1O15155 118 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 HMGB3O15347 200 aaKnown RBP2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 MFSD11O43934 449 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 SMIM10L2AP0DMW4 78 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 SMIM10L2BP0DMW5 78 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 CD28P10747 220 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 S100A2P29034 98 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 G6PCP35575 357 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 SCGB2B2Q4G0G5 96 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 TMEM128Q5BJH2 165 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 TNFAIP8L3Q5GJ75 292 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 H1FOOQ8IZA3 346 aaPredicted RBP2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 C12orf45Q8N5I9 185 aaPredicted RBP2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 ZNF615Q8N8J6 731 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 ZFP62Q8NB50 900 aaPredicted RBP2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 OR13D1Q8NGV5 346 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 GPR119Q8TDV5 335 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 MAFIPQ8WZ33 124 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 C12orf43Q96C57 262 aaKnown RBP2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 IP6K3Q96PC2 410 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 RNF5Q99942 180 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 MAP1LC3BQ9GZQ8 125 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 OR2D2Q9H210 308 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 OR52A1Q9UKL2 312 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 NID2Q14112 1375 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 ROBO3Q96MS0 1386 aa2.82□□□□□ -1.96
AC055878.1-201ENST00000531858 TRBV19A0A075B6N1 114 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 hCG_1818297A0A087WSY0 165 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 IGKV1-12A0A0C4DH73 117 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 TMEM269A0A1B0GVZ9 245 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 EFCAB10A6NFE3 127 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 A8MT66 165 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 A8MUN3 132 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 C9JCJ5 164 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 J3QRK9 145 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 M0QZK8 103 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 NDUFB2O95178 105 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 IGKV1D-12P01611 117 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 IGHV3-30-3P0DP02 117 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 CRABP1P29762 137 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 TAF6P49848 677 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 RPS20P60866 119 aaKnown RBP2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 NCALDP61601 193 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 TBPL1P62380 186 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 ZNF79Q15937 498 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 SGPP2Q8IWX5 399 aa2.81□□□□□ -1.96
AC055878.1-201ENST00000531858 SAXO1Q8IYX7 474 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms