RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 OR7A5Q15622 319 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 NRF1Q16656 503 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 IQCJQ1A5X6 159 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 TIGITQ495A1 244 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 GLT8D1Q68CQ7 371 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 PRSS54Q6PEW0 395 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 SCGB1D4Q6XE38 83 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 Q6ZSR6 202 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 NEGR1Q7Z3B1 354 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 ARPINQ7Z6K5 226 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 UBALD2Q8IYN6 164 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 GAPTQ8N292 157 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF615Q8N8J6 731 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM229BQ8NBD8 167 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR4M1Q8NGD0 313 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR4K5Q8NGD3 323 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR52R1Q8NGF1 315 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR1N2Q8NGR9 330 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR2A1Q8NGT9 310 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR2T4Q8NH00 348 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR10D3Q8NH80 312 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 PPTC7Q8NI37 304 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 NEIL3Q8TAT5 605 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 CT55Q8WUE5 264 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 BLNKQ8WV28 456 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 PP6455Q8WZ26 134 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 CLDN23Q96B33 292 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 GALNT14Q96FL9 552 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 DERL3Q96Q80 235 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 TSPAN32Q96QS1 320 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 PLEKHF1Q96S99 279 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 S100A13Q99584 98 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 MRPL57Q9BQC6 102 aaKnown RBP2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR2H1Q9GZK4 316 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR8D2Q9GZM6 311 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 OR52D1Q9H346 318 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 CXorf21Q9HAI6 301 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 DMAC2Q9NW81 257 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 MRPL27Q9P0M9 148 aaKnown RBP2.44□□□□□ -2.02
PTPRK-220ENST00000531466 TRMT112Q9UI30 125 aaKnown RBP2.44□□□□□ -2.02
PTPRK-220ENST00000531466 HIGD1AQ9Y241 93 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 SOX21Q9Y651 276 aaPredicted RBP2.44□□□□□ -2.02
PTPRK-220ENST00000531466 GRIN2AQ12879 1464 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 MAGI2Q86UL8 1455 aa2.44□□□□□ -2.02
PTPRK-220ENST00000531466 NAV1Q8NEY1 1877 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 ARHGEF11O15085 1522 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 TMEM269A0A1B0GVZ9 245 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 C5orf49A4QMS7 147 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 RIIAD1A6NNX1 92 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 BBIP1A8MTZ0 92 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 CDC42EP2O14613 210 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 ICOSLGO75144 302 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 REM1O75628 298 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 DPM2O94777 84 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 WISP3O95389 354 aaPredicted RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 NCR2O95944 276 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 CRYBA1P05813 215 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 SOD3P08294 240 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 CT45A10P0DMU9 189 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF708P17019 499 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 GABRG2P18507 467 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 RPS3P23396 243 aaKnown RBP eCLIP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 REG1BP48304 166 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 UBE2E1P51965 193 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 APOC4P55056 127 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 S100A10P60903 97 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 RND3P61587 244 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 HBG1P69891 147 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 HBG2P69892 147 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 DCDP81605 110 aaKnown RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 IFITM3Q01628 133 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 CAV1Q03135 178 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 MEF2CQ06413 473 aaPredicted RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 HSD52Q0P140 79 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 IL15RAQ13261 267 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF266Q14584 549 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 HERPUD1Q15011 391 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 JOSD1Q15040 202 aaPredicted RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 PAFAH1B3Q15102 231 aaKnown RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 PEA15Q15121 130 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 MS4A13Q5J8X5 152 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 FAM201AQ5SY85 155 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 IBA57Q5T440 356 aaKnown RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 BCL2L15Q5TBC7 163 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 FAM219BQ5XKK7 198 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 OR2T5Q6IEZ7 315 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF550Q7Z398 422 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 ZNF695Q8IW36 515 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 C14orf178Q8N769 122 aaPredicted RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 OR11G2Q8NGC1 345 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 OR2T29Q8NH02 315 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 OR8S1Q8NH09 359 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 C15orf40Q8WUR7 153 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 MAGOHBQ96A72 148 aaKnown RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 ADAT3Q96EY9 351 aaPredicted RBP2.43□□□□□ -2.02
PTPRK-220ENST00000531466 UBE2E2Q96LR5 201 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 LINC00477Q96M19 166 aa2.43□□□□□ -2.02
PTPRK-220ENST00000531466 LINC00052Q96N35 136 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms