RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SHOXO15266 292 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 IGLV1-51P01701 117 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 RRASP10301 218 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 RAB3BP20337 219 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 ZP3P21754 424 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 MYL9P24844 172 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 HSPA13P48723 471 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 SRSF7Q16629 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
CPSF1-205ENST00000531042 RTL8BQ17RB0 113 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 MRGPRG-AS1Q2M3A8 158 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 IZUMO2Q6UXV1 221 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 Q6ZS49 121 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 HAPLN4Q86UW8 402 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 GINS4Q9BRT9 223 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 BLOC1S6Q9UL45 172 aa12.09□□□□□ -0.47
CPSF1-205ENST00000531042 RBM7Q9Y580 266 aaKnown RBP12.09□□□□□ -0.47
CPSF1-205ENST00000531042 METTL21EPA6NDL7 271 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 ARFRP1Q13795 201 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-205ENST00000531042 ANKRD13BQ86YJ7 626 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 H1FOOQ8IZA3 346 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-205ENST00000531042 Q8N1Y9 231 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 DDB2Q92466 427 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 CENPOQ9BU64 300 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 RSRP1Q9BUV0 290 aa12.08□□□□□ -0.48
CPSF1-205ENST00000531042 TINAGL1Q9GZM7 467 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-205ENST00000531042 IGKV1D-8A0A087WSZ0 117 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 LINC00473A8K010 186 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 GALP22466 123 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 AADACP22760 399 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 DUTP33316 252 aaKnown RBP12.07□□□□□ -0.48
CPSF1-205ENST00000531042 TALDO1P37837 337 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 C22orf42Q6IC83 251 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 NR2C2APQ86WQ0 139 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 TEX45Q8NA69 505 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 ZMAT4Q9H898 229 aa12.07□□□□□ -0.48
CPSF1-205ENST00000531042 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
CPSF1-205ENST00000531042 MSGN1A6NI15 193 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 CRYZL1O95825 349 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 APELAP0DMC3 54 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 UBE2KP61086 200 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 DEFA5Q01523 94 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 DYRK1AQ13627 763 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 ARL6IP1Q15041 203 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 VMA21Q3ZAQ7 101 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 ZNF343Q6P1L6 599 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 IL34Q6ZMJ4 242 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 USMG5Q96IX5 58 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 PHB2Q99623 299 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 COA4Q9NYJ1 87 aa12.06□□□□□ -0.48
CPSF1-205ENST00000531042 PEF1Q9UBV8 284 aaKnown RBP12.06□□□□□ -0.48
CPSF1-205ENST00000531042 A8MZ25 164 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 RBMXL2O75526 392 aaKnown RBP12.05□□□□□ -0.48
CPSF1-205ENST00000531042 IGHV4-30-4P0DP06 118 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 DTYMKP23919 212 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 SYNJ2BPP57105 145 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 TNXAQ16473 311 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 PRSS8Q16651 343 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 CDNFQ49AH0 187 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 CASC10Q5T4H9 136 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 IDO2Q6ZQW0 420 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 ADAD2Q8NCV1 583 aaKnown RBP12.05□□□□□ -0.48
CPSF1-205ENST00000531042 OR9G4Q8NGQ1 327 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 OSR1Q8TAX0 266 aaPredicted RBP12.05□□□□□ -0.48
CPSF1-205ENST00000531042 RAB26Q9ULW5 256 aa12.05□□□□□ -0.48
CPSF1-205ENST00000531042 SMIM30A4D0T7 59 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 TRBV12-3P01733 135 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 GABARAPL2P60520 117 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 ZNF645Q8N7E2 425 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 SRSF12Q8WXF0 261 aaKnown RBP12.04□□□□□ -0.48
CPSF1-205ENST00000531042 TM2D3Q9BRN9 247 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 ADAM30Q9UKF2 790 aa12.04□□□□□ -0.48
CPSF1-205ENST00000531042 TNCP24821 2201 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 NOTOA8MTQ0 251 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 H0Y980 276 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 J3QRK9 145 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 MRPS14O60783 128 aaKnown RBP12.03□□□□□ -0.48
CPSF1-205ENST00000531042 SAA1P0DJI8 122 aaPredicted RBP12.03□□□□□ -0.48
CPSF1-205ENST00000531042 TATDN3Q17R31 274 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 UBE2UQ5VVX9 321 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 HACD4Q5VWC8 232 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 SGPP2Q8IWX5 399 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 ACOT12Q8WYK0 555 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 ST6GALNAC5Q9BVH7 336 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 DCSTAMPQ9H295 470 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 TXNL4BQ9NX01 149 aaKnown RBP12.03□□□□□ -0.48
CPSF1-205ENST00000531042 OR2W1Q9Y3N9 320 aa12.03□□□□□ -0.48
CPSF1-205ENST00000531042 MPPED1O15442 326 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 FCGR3BO75015 233 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 HLA-DQB1P01920 261 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 CSN3P07498 182 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 CTXN2P0C2S0 81 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 NFYAP23511 347 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-205ENST00000531042 FGF9P31371 208 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-205ENST00000531042 CDK10Q15131 360 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms