RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PATJQ8NI35 1801 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 SYNGR3O43761 229 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 ARL14EPLP0DKL9 152 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 ANOS1P23352 680 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 CX3CL1P78423 397 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 RELBQ01201 579 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 TGIF1Q15583 401 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 RNFT1Q5M7Z0 435 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 NRIP2Q9BQI9 281 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF703Q9H7S9 590 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-227ENST00000530748 RALYQ9UKM9 306 aaKnown RBP7.25□□□□□ -1.25
CTNND1-227ENST00000530748 GREB1LQ9C091 1923 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-227ENST00000530748 PGPA6NDG6 321 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 NPIPB6E9PJ23 425 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 ASPHD2Q6ICH7 369 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 PPP1R32Q7Z5V6 425 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 OR4C13Q8NGP0 309 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 PGLYRP4Q96LB8 373 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 TIMP4Q99727 224 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 DNAJC4Q9NNZ3 241 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 IL17BQ9UHF5 180 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 MARCH11A6NNE9 402 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 NPIPB11E5RHQ5 1161 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 SLC25A17O43808 307 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 ZG16O60844 167 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF883P0CG24 379 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 APOBEC3AP31941 199 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-227ENST00000530748 RND2P52198 227 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 C5orf66Q9H5L9 145 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 GP6Q9HCN6 339 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 CA2P00918 260 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 IGKV3-11P04433 115 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 CXorf66Q5JRM2 361 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-227ENST00000530748 NUP205Q92621 2012 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 CGB1A6NKQ9 187 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 TIAF1O95411 115 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF250P15622 560 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 NMUP48645 174 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 CSRP2Q16527 193 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 LY6EQ16553 131 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 AMMECR1LQ6DCA0 310 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 Q6ZT83 130 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 SGMS2Q8NHU3 365 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 MAP1LC3AQ9H492 121 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 EGR4Q05215 589 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 C19orf48Q6RUI8 117 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 PQLC2Q6ZP29 291 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 RTN4RL2Q86UN3 420 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 GALNT14Q96FL9 552 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 CHCHD2Q9Y6H1 151 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-227ENST00000530748 ANKRD12Q6UB98 2062 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 FAM181BA6NEQ2 426 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 FOXH1O75593 365 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 NUDT3O95989 172 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 REG1AP05451 166 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 CKS2P33552 79 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 RSPO4Q2I0M5 234 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-227ENST00000530748 ACSF3Q4G176 576 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-227ENST00000530748 LEAP2Q969E1 77 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 SMIM12Q96EX1 92 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 SPSB2Q99619 263 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 NPDC1Q9NQX5 325 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-227ENST00000530748 TMEM14DPA8MWL7 114 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 PIN1P1O15428 100 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 RECKO95980 971 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 C8orf88P0DMB2 117 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 GLIPR1P48060 266 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 ACP7Q6ZNF0 438 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 PNKDQ8N490 385 aa7.24□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF646O15015 1829 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-227ENST00000530748 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 A6NJY4 79 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 C17orf51A8MQB3 221 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 TSPOP30536 169 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 MFAP2P55001 183 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 ATP5J2P56134 94 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 SPATA45Q537H7 98 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 DNLZQ5SXM8 178 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 MRPL18Q9H0U6 180 aaKnown RBP7.23□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF324O75467 553 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-227ENST00000530748 PLAUP00749 431 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 THY1P04216 161 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 MEF2BQ02080 365 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-227ENST00000530748 LINC01590Q5TEZ4 76 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 DCTN5Q9BTE1 182 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 F12P00748 615 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-227ENST00000530748 GCGP01275 180 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 HLA-DQA1P01909 254 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 NPBWR2P48146 333 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 IFITM3Q01628 133 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF660Q6AZW8 331 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-227ENST00000530748 POC1AQ8NBT0 407 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 C1orf162Q8NEQ5 155 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-227ENST00000530748 COPS9Q8WXC6 57 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 OR4C12Q96R67 309 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 RARRES2Q99969 163 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 GDF15Q99988 308 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 SH3BGRL3Q9H299 93 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 TUBA4BQ9H853 241 aa7.23□□□□□ -1.25
CTNND1-227ENST00000530748 TM4SF5O14894 197 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms