RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 PHLDA2Q53GA4 152 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 TMEM177Q53S58 311 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 OR2B11Q5JQS5 317 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 TRIQKQ629K1 86 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 LPCAT3Q6P1A2 487 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 FLYWCH2Q96CP2 140 aaKnown RBP16.93■□□□□ 0.3
CAPN1-220ENST00000530567 RNF5Q99942 180 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 PRRT1Q99946 306 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 MCUBQ9NWR8 336 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 FCGR3BO75015 233 aa16.92■□□□□ 0.3
CAPN1-220ENST00000530567 COMPP49747 757 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-220ENST00000530567 DEDD2Q8WXF8 326 aa16.92■□□□□ 0.3
CAPN1-220ENST00000530567 PRSS22Q9GZN4 317 aa16.92■□□□□ 0.3
CAPN1-220ENST00000530567 PRELID3BQ9Y3B1 194 aa16.92■□□□□ 0.3
CAPN1-220ENST00000530567 SRRM4A7MD48 611 aaKnown RBP16.91■□□□□ 0.3
CAPN1-220ENST00000530567 PEX14O75381 377 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 CRYZL1O95825 349 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 IGLV2-23P01705 113 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 RLN1P04808 185 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 PGAM2P15259 253 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 PI3P19957 117 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 RPS16P62249 146 aaKnown RBP16.91■□□□□ 0.3
CAPN1-220ENST00000530567 FOXL1Q12952 345 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 AWAT1Q58HT5 328 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 ZNF57Q68EA5 555 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-220ENST00000530567 IDO2Q6ZQW0 420 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 CMTM1Q8IZ96 169 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 OR51H1Q8NH63 302 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 MARCH1Q8TCQ1 289 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 CCDC32Q9BV29 185 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 SLC2A9Q9NRM0 540 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 LIN7CQ9NUP9 197 aaKnown RBP16.91■□□□□ 0.3
CAPN1-220ENST00000530567 MMP24Q9Y5R2 645 aa16.91■□□□□ 0.3
CAPN1-220ENST00000530567 RRHO14718 337 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 RAMP3O60896 148 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 FAUP35544 74 aaKnown RBP16.9■□□□□ 0.3
CAPN1-220ENST00000530567 CATR1Q13166 79 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 PSG5Q15238 335 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 C5orf64Q2M2E5 130 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 TMEM95Q3KNT9 176 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 HARBI1Q96MB7 349 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 SERTAD4Q9NUC0 356 aa16.9■□□□□ 0.3
CAPN1-220ENST00000530567 CLPSL1A2RUU4 121 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 VSIG10L2P0DP72 767 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 CD40LGP29965 261 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 RND3P61587 244 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 OR4S2Q8NH73 311 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 ZNF486Q96H40 463 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-220ENST00000530567 TSNAXQ99598 290 aaKnown RBP16.89■□□□□ 0.29
CAPN1-220ENST00000530567 WDR12Q9GZL7 423 aaKnown RBP16.89■□□□□ 0.29
CAPN1-220ENST00000530567 FBXL15Q9H469 300 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 SCP2D1Q9UJQ7 156 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 TENM1Q9UKZ4 2725 aa16.89■□□□□ 0.29
CAPN1-220ENST00000530567 SHOXO15266 292 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 RBFOX2O43251 390 aaKnown RBP eCLIP16.88■□□□□ 0.29
CAPN1-220ENST00000530567 SPDEFO95238 335 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 CTSDP07339 412 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-220ENST00000530567 ECI1P42126 302 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 KIR2DS2P43631 304 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 LGALS7P47929 136 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 CBX3Q13185 183 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 SURF2Q15527 256 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-220ENST00000530567 TBC1D26Q86UD7 250 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 SPAG16Q8N0X2 631 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 OR2T6Q8NHC8 308 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 OSR1Q8TAX0 266 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-220ENST00000530567 RASL11BQ9BPW5 248 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 HSPB9Q9BQS6 159 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 BEX1Q9HBH7 125 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 TPSG1Q9NRR2 321 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 KIAA1456Q9P272 454 aa16.88■□□□□ 0.29
CAPN1-220ENST00000530567 SLC25A17O43808 307 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 CRYGBP07316 175 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 INPP1P49441 399 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 PIGPP57054 158 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 PROK1P58294 105 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 ZNF846Q147U1 533 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 RTBDNQ9BSG5 229 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-220ENST00000530567 C5orf66Q9H5L9 145 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 GPR132Q9UNW8 380 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 PLXNB1O43157 2135 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 STAB1Q9NY15 2570 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 A0A1B0GUS0 222 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 LINC00854A0A1B0GVQ3 168 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 IGHG2P01859 326 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 HLA-DRB1P01911 266 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 F2RP25116 425 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 C9orf152Q5JTZ5 239 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 ZFAND1Q8TCF1 268 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 METTL1Q9UBP6 276 aaKnown RBP16.87■□□□□ 0.29
CAPN1-220ENST00000530567 VSIG4Q9Y279 399 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 RNF114Q9Y508 228 aa16.87■□□□□ 0.29
CAPN1-220ENST00000530567 LINC01548A6NM66 108 aa16.86■□□□□ 0.29
CAPN1-220ENST00000530567 MPPED1O15442 326 aa16.86■□□□□ 0.29
CAPN1-220ENST00000530567 PLA2G10O15496 165 aa16.86■□□□□ 0.29
CAPN1-220ENST00000530567 BTCP35070 178 aa16.86■□□□□ 0.29
CAPN1-220ENST00000530567 MRGPRG-AS1Q2M3A8 158 aa16.86■□□□□ 0.29
CAPN1-220ENST00000530567 ZNF585BQ52M93 769 aa16.86■□□□□ 0.29
CAPN1-220ENST00000530567 IGHV7-81A0A0B4J1V7 117 aa16.85■□□□□ 0.29
CAPN1-220ENST00000530567 FCN1O00602 326 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms