RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 RBMY1EA6NEQ0 496 aaKnown RBP12.15□□□□□ -0.46
COL16A1-216ENST00000529928 MRPS14O60783 128 aaKnown RBP12.15□□□□□ -0.46
COL16A1-216ENST00000529928 PROP1O75360 226 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 RBMY1DP0C7P1 496 aaKnown RBP12.15□□□□□ -0.46
COL16A1-216ENST00000529928 CALRP27797 417 aaKnown RBP12.15□□□□□ -0.46
COL16A1-216ENST00000529928 DEFA5Q01523 94 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 DYRK1AQ13627 763 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 UBE2UQ5VVX9 321 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 FAM89BQ8N5H3 189 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 PTX4Q96A99 478 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 RIMS4Q9H426 269 aaPredicted RBP12.15□□□□□ -0.46
COL16A1-216ENST00000529928 COA4Q9NYJ1 87 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 OR1A1Q9P1Q5 309 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 ZNF221Q9UK13 617 aa12.15□□□□□ -0.46
COL16A1-216ENST00000529928 LY6G6CO95867 125 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 P2RY14Q15391 338 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 CD300EQ496F6 205 aaPredicted RBP12.14□□□□□ -0.47
COL16A1-216ENST00000529928 SPARTQ8N0X7 666 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 SRD5A3Q9H8P0 318 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 PLEKHJ1Q9NW61 149 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 MGAT4AQ9UM21 535 aa12.14□□□□□ -0.47
COL16A1-216ENST00000529928 TRBV6-6A0A0A6YYG2 114 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 OR11H12B2RN74 326 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 IGLV2-23P01705 113 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 CD7P09564 240 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 TMEM50BP56557 158 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 CLDN12P56749 244 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 LINC00205P59089 165 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
COL16A1-216ENST00000529928 TRAV1-2A0A0B4J238 106 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 TRDV1A0A1B0GX56 115 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 ZNF785A8K8V0 405 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 SOCS1O15524 211 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 CRYGBP07316 175 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 PLA2G7Q13093 441 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 RAB11BQ15907 218 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 NR2C2APQ86WQ0 139 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.12□□□□□ -0.47
COL16A1-216ENST00000529928 DYNLRB2Q8TF09 96 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 PHB2Q99623 299 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 YTHDF1Q9BYJ9 559 aaKnown RBP12.12□□□□□ -0.47
COL16A1-216ENST00000529928 WFDC10AQ9H1F0 79 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 PLGRKTQ9HBL7 147 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 V9GY05 133 aa12.12□□□□□ -0.47
COL16A1-216ENST00000529928 M0R1X1 148 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 BMPR1BO00238 502 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 GALP22466 123 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 OR10A3P58181 314 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 C2orf76Q3KRA6 126 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
COL16A1-216ENST00000529928 FAM3DQ96BQ1 224 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 HSF4Q9ULV5 492 aa12.11□□□□□ -0.47
COL16A1-216ENST00000529928 FAM223BA6NKX1 122 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 RBMXL2O75526 392 aaKnown RBP12.1□□□□□ -0.47
COL16A1-216ENST00000529928 SCTP09683 121 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 OR9G9P0C7N8 305 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 APELAP0DMC3 54 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 CBX3Q13185 183 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 GUCA2BQ16661 112 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 PLAC9Q5JTB6 97 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 FAM223AQ8IWN6 122 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 DDB2Q92466 427 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 HDHD3Q9BSH5 251 aaPredicted RBP12.1□□□□□ -0.47
COL16A1-216ENST00000529928 Q9H521 79 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 ZC4H2Q9NQZ6 224 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 AK3Q9UIJ7 227 aa12.1□□□□□ -0.47
COL16A1-216ENST00000529928 RRP15Q9Y3B9 282 aaKnown RBP12.1□□□□□ -0.47
COL16A1-216ENST00000529928 TMEM272A0A1B0GTI8 110 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 NUPR2A6NF83 97 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 SHOXO15266 292 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 TUSC2O75896 110 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 PSMD7P51665 324 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 RHOGP84095 191 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 TAGLNQ01995 201 aaKnown RBP12.09□□□□□ -0.47
COL16A1-216ENST00000529928 EXOSC2Q13868 293 aaKnown RBP12.09□□□□□ -0.47
COL16A1-216ENST00000529928 HES5Q5TA89 166 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 KCTD12Q96CX2 325 aaKnown RBP12.09□□□□□ -0.47
COL16A1-216ENST00000529928 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 URM1Q9BTM9 101 aaKnown RBP12.09□□□□□ -0.47
COL16A1-216ENST00000529928 Q9N2K0 584 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 AKIP1Q9NQ31 210 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 C12orf4Q9NQ89 552 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 RDH8Q9NYR8 311 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
COL16A1-216ENST00000529928 ZNF230Q9UIE0 474 aaPredicted RBP12.09□□□□□ -0.47
COL16A1-216ENST00000529928 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
COL16A1-216ENST00000529928 ALMS1Q8TCU4 4167 aa12.08□□□□□ -0.48
COL16A1-216ENST00000529928 IFITM5A6NNB3 132 aa12.08□□□□□ -0.48
COL16A1-216ENST00000529928 MPPED1O15442 326 aa12.08□□□□□ -0.48
COL16A1-216ENST00000529928 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.48
COL16A1-216ENST00000529928 KIR2DS2P43631 304 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms