RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 VPS13DQ5THJ4 4388 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 IGKV1-6A0A0C4DH72 117 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 APOA2P02652 100 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 SRMP19623 302 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 CLDN12P56749 244 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 HLA-DRB3P79483 266 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 DEFA5Q01523 94 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 DEFB114Q30KQ6 69 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 HSD17B12Q53GQ0 312 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 GLT8D1Q68CQ7 371 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 LYG2Q86SG7 212 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 PDPNQ86YL7 162 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 WFDC3Q8IUB2 231 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 MS4A15Q8N5U1 240 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 OR6M1Q8NGM8 313 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 PHB2Q99623 299 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 CHMP1AQ9HD42 196 aaPredicted RBP7.83□□□□□ -1.16
COPB1-207ENST00000529866 TP53TG1Q9Y2A0 90 aa7.83□□□□□ -1.16
COPB1-207ENST00000529866 AK6Q9Y3D8 172 aaKnown RBP7.83□□□□□ -1.16
COPB1-207ENST00000529866 BMPR1BO00238 502 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 SLC17A2O00624 439 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 TUSC2O75896 110 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 BPNT1O95861 308 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 IGKV1-16P04430 117 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 SCTP09683 121 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 KIR2DS2P43631 304 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 MAP2K4P45985 399 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 TMEM50BP56557 158 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 FABP5Q01469 135 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 ANKRD55Q3KP44 614 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 PLAC9Q5JTB6 97 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 FAM209BQ5JX69 171 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 DRAXINQ8NBI3 349 aaPredicted RBP7.82□□□□□ -1.16
COPB1-207ENST00000529866 OR52B4Q8NGK2 314 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 KCNG3Q8TAE7 436 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 EDARADDQ8WWZ3 215 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 WDR89Q96FK6 387 aaPredicted RBP7.82□□□□□ -1.16
COPB1-207ENST00000529866 C5orf30Q96GV9 206 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 AGMATQ9BSE5 352 aa7.82□□□□□ -1.16
COPB1-207ENST00000529866 TRBV6-6A0A0A6YYG2 114 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 C2orf70A6NJV1 201 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 FAM223BA6NKX1 122 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 ITGB1BP1O14713 200 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 CD3GP09693 182 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 HSMCR30P0CW71 290 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 FOLR2P14207 255 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 APOC4P55056 127 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 SSBP2P81877 361 aaPredicted RBP7.81□□□□□ -1.16
COPB1-207ENST00000529866 TPBGQ13641 420 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 EXOSC2Q13868 293 aaKnown RBP7.81□□□□□ -1.16
COPB1-207ENST00000529866 Q6ZWC4 215 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 MOB1BQ7L9L4 216 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 FAM223AQ8IWN6 122 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 FAM89BQ8N5H3 189 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 UFD1Q92890 307 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 ARHGAP5-AS1Q96IT6 56 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 PECRQ9BY49 303 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 C11orf54Q9H0W9 315 aaPredicted RBP7.81□□□□□ -1.16
COPB1-207ENST00000529866 DUSP21Q9H596 190 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 Q9N2K0 584 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 PLEKHJ1Q9NW61 149 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 KCNK7Q9Y2U2 307 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
COPB1-207ENST00000529866 MPPED1O15442 326 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 SPRY2O43597 315 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 CRHBPP24387 322 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 OR10A3P58181 314 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 RHOGP84095 191 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 EWSR1Q01844 656 aaKnown RBP eCLIP7.8□□□□□ -1.161e-10■■■■□ 21.5
COPB1-207ENST00000529866 ATP5G2Q06055 141 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 MLLT11Q13015 90 aaPredicted RBP7.8□□□□□ -1.16
COPB1-207ENST00000529866 CBX3Q13185 183 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 SSX1Q16384 188 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 ZNF57Q68EA5 555 aaPredicted RBP7.8□□□□□ -1.16
COPB1-207ENST00000529866 ZNF383Q8NA42 475 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 PHLDA1Q8WV24 401 aaPredicted RBP7.8□□□□□ -1.16
COPB1-207ENST00000529866 VCXQ9H320 206 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 PLGRKTQ9HBL7 147 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 SLC35D1Q9NTN3 355 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 SCN3BQ9NY72 215 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 ZNF230Q9UIE0 474 aaPredicted RBP7.8□□□□□ -1.16
COPB1-207ENST00000529866 ZNF221Q9UK13 617 aa7.8□□□□□ -1.16
COPB1-207ENST00000529866 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.79□□□□□ -1.16
COPB1-207ENST00000529866 TMEM272A0A1B0GTI8 110 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 MSGN1A6NI15 193 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 UBE2CO00762 179 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 RGS10O43665 173 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 OR9G9P0C7N8 305 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 MED14OSP0DP75 135 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 ZBTB25P24278 435 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 CALRP27797 417 aaKnown RBP7.79□□□□□ -1.16
COPB1-207ENST00000529866 PJVKQ0ZLH3 352 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 RAB11BQ15907 218 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 DEFB135Q30KP9 77 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 HES5Q5TA89 166 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 ADAD2Q8NCV1 583 aaKnown RBP7.79□□□□□ -1.16
COPB1-207ENST00000529866 MAFIPQ8WZ33 124 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 HARBI1Q96MB7 349 aa7.79□□□□□ -1.16
COPB1-207ENST00000529866 URM1Q9BTM9 101 aaKnown RBP7.79□□□□□ -1.16
COPB1-207ENST00000529866 C12orf4Q9NQ89 552 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms