RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 TIMM23BQ5SRD1 257 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 HACD4Q5VWC8 232 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 C4orf22Q6V702 233 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 IDO2Q6ZQW0 420 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 LYZL2Q7Z4W2 148 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 PHF13Q86YI8 300 aaPredicted RBP1.93□□□□□ -2.1
SVIP-203ENST00000529848 CRLF3Q8IUI8 442 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 SLC25A45Q8N413 288 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 OR2D3Q8NGH3 330 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 LHFPL5Q8TAF8 219 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 DYNC2LI1Q8TCX1 351 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 KCTD4Q8WVF5 259 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 BORCS5Q969J3 196 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 MAL2Q969L2 176 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 APOBEC3DQ96AK3 386 aaPredicted RBP1.93□□□□□ -2.1
SVIP-203ENST00000529848 CLDN23Q96B33 292 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 NIPSNAP1Q9BPW8 284 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 PCBD2Q9H0N5 130 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 ALX4Q9H161 411 aaPredicted RBP1.93□□□□□ -2.1
SVIP-203ENST00000529848 FBXL15Q9H469 300 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 TRABDQ9H4I3 376 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 USE1Q9NZ43 259 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 NDUFAF1Q9Y375 327 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 ATP7BP35670 1465 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 QRICH2Q9H0J4 1663 aa1.93□□□□□ -2.1
SVIP-203ENST00000529848 USP42Q9H9J4 1324 aaKnown RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 TULP4Q9NRJ4 1543 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 TRPM1Q7Z4N2 1603 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 COL24A1Q17RW2 1714 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 ARHGEF28Q8N1W1 1705 aaKnown RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 BTAF1O14981 1849 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 A0A1B0GX12 115 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 GGTLC3B5MD39 225 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 F8W036 122 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 H3BMM0 161 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 SULT1C2O00338 296 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 TGOLN2O43493 480 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 SERPINA1P01009 418 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 PDYNP01213 254 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 CALB1P05937 261 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 CD36P16671 472 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 ATF1P18846 271 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 SLCO1A2P46721 670 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 CDK9P50750 372 aaKnown RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 AESQ08117 197 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 MED21Q13503 144 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 RAB31Q13636 194 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 TMED2Q15363 201 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 SLC36A2Q495M3 483 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 OR10J3Q5JRS4 329 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 FAM162BQ5T6X4 162 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 ELP2Q6IA86 826 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 WDR59Q6PJI9 974 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 CLEC20AQ6ZU45 233 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 DHFR2Q86XF0 187 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 Q8N402 240 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 RIBC1Q8N443 379 aaPredicted RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 C12orf29Q8N999 325 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 ZIC4Q8N9L1 334 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 FER1L6-AS1Q8NA97 138 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 TMEM35BQ8NCS4 154 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 LY6G5BQ8NDX9 201 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 OR11L1Q8NGX0 322 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 RNASEH2CQ8TDP1 164 aaKnown RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 MAFIPQ8WZ33 124 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 PTH2Q96A98 100 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 UBE2WQ96B02 151 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 PPWD1Q96BP3 646 aaKnown RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 DDIT4LQ96D03 193 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 SLC25A44Q96H78 314 aaPredicted RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 REEP6Q96HR9 211 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 TRIB3Q96RU7 358 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 EBNA1BP2Q99848 306 aaKnown RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 TIPINQ9BVW5 301 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 C11orf49Q9H6J7 331 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 STOML2Q9UJZ1 356 aa1.92□□□□□ -2.1
SVIP-203ENST00000529848 POLR3HQ9Y535 204 aaPredicted RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 DHX57Q6P158 1386 aaKnown RBP1.92□□□□□ -2.1
SVIP-203ENST00000529848 PPIP5K1Q6PFW1 1433 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 YTHDC2Q9H6S0 1430 aaKnown RBP1.91□□□□□ -2.1
SVIP-203ENST00000529848 SDK2Q58EX2 2172 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 YLPM1P49750 1951 aaKnown RBP1.91□□□□□ -2.1
SVIP-203ENST00000529848 KIF24Q5T7B8 1368 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.91□□□□□ -2.1
SVIP-203ENST00000529848 OR5H14A6NHG9 310 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 C9J4A7 227 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 H0Y980 276 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 SLC31A1O15431 190 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 PSCAO43653 123 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 PPBPP02775 128 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 LINC00614P0C842 121 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 PET100P0DJ07 73 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 CGB3P0DN86 165 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 CGB7P0DN87 165 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 KCNE1P15382 129 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 CRYBA4P53673 196 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 OR10A3P58181 314 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 KRTAP10-1P60331 282 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 DHRS2Q13268 280 aa1.91□□□□□ -2.1
SVIP-203ENST00000529848 SSX7Q7RTT5 188 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms