RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 NR2C2APQ86WQ0 139 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 H1FOOQ8IZA3 346 aaPredicted RBP7.49□□□□□ -1.21
CHD7-208ENST00000528280 OR11H1Q8NG94 326 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 DYNC2LI1Q8TCX1 351 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 OR2D2Q9H210 308 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 AKIP1Q9NQ31 210 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 SDHAF2Q9NX18 166 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 CCDC59Q9P031 241 aaKnown RBP7.49□□□□□ -1.21
CHD7-208ENST00000528280 ZNF230Q9UIE0 474 aaPredicted RBP7.49□□□□□ -1.21
CHD7-208ENST00000528280 PRELID3BQ9Y3B1 194 aa7.49□□□□□ -1.21
CHD7-208ENST00000528280 A0A0B4J203 849 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 A0A0G2JLM5 398 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 A0A1W2PN81 502 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 H3BUA1 57 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 I3L521 148 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 FCN1O00602 326 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 SHOXO15266 292 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 CREBL2O60519 120 aaPredicted RBP7.48□□□□□ -1.21
CHD7-208ENST00000528280 HLA-DQB1P01920 261 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 IGKV1-16P04430 117 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 CHRNA7P36544 502 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 CBX5P45973 191 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 MXD1Q05195 221 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 ZNF616Q08AN1 781 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 FHL3Q13643 280 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 KIAA0141Q14154 515 aaPredicted RBP7.48□□□□□ -1.21
CHD7-208ENST00000528280 FXYD3Q14802 87 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 RGS21Q2M5E4 152 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 ZNF260Q3ZCT1 412 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 TMEM177Q53S58 311 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 VAX1Q5SQQ9 334 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 IDNKQ5T6J7 187 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 UNQ5815/PRO19632Q6UWF5 114 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 C18orf65Q6ZTR6 163 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 TEX45Q8NA69 505 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 OR6Q1Q8NGQ2 317 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 OSR1Q8TAX0 266 aaPredicted RBP7.48□□□□□ -1.21
CHD7-208ENST00000528280 S100A16Q96FQ6 103 aaKnown RBP7.48□□□□□ -1.21
CHD7-208ENST00000528280 CLCC1Q96S66 551 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 AIFM2Q9BRQ8 373 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 NXF2Q9GZY0 626 aaKnown RBP7.48□□□□□ -1.21
CHD7-208ENST00000528280 KLK15Q9H2R5 256 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 RHBDL2Q9NX52 303 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 OR2W1Q9Y3N9 320 aa7.48□□□□□ -1.21
CHD7-208ENST00000528280 A0A1B0GVG6 124 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 SEC14L6B5MCN3 397 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 SLC25A17O43808 307 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 AIREO43918 545 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 PFDN1O60925 122 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 BRI3O95415 125 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 CA2P00918 260 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 HSPB1P04792 205 aaKnown RBP7.47□□□□□ -1.21
CHD7-208ENST00000528280 EGR2P11161 476 aaPredicted RBP7.47□□□□□ -1.21
CHD7-208ENST00000528280 SNRPBP14678 240 aaKnown RBP7.47□□□□□ -1.21
CHD7-208ENST00000528280 ECSCRQ19T08 205 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 VMA21Q3ZAQ7 101 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 C19orf54Q5BKX5 351 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 ZNF429Q86V71 674 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 ZNF645Q8N7E2 425 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 BVESQ8NE79 360 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 LFNGQ8NES3 379 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 MAFIPQ8WZ33 124 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 ARPC1AQ92747 370 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 HARBI1Q96MB7 349 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 ANXA10Q9UJ72 324 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 SPATA2Q9UM82 520 aa7.47□□□□□ -1.21
CHD7-208ENST00000528280 MRPS7Q9Y2R9 242 aaKnown RBP7.47□□□□□ -1.21
CHD7-208ENST00000528280 TRAV18A0A075B6X5 111 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 SMIM30A4D0T7 59 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 LINC01619G3V211 115 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 ACTL6BO94805 426 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 CRYGBP07316 175 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 AADACP22760 399 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 HOXD3P31249 432 aaPredicted RBP7.46□□□□□ -1.22
CHD7-208ENST00000528280 DUTP33316 252 aaKnown RBP7.46□□□□□ -1.22
CHD7-208ENST00000528280 ARPC4P59998 168 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 KRTAP10-11P60412 298 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 UBE2KP61086 200 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 ZNF45Q02386 682 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 MSMO1Q15800 293 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 DEFB136Q30KP8 78 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 ZBTB34Q8NCN2 500 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 LGALS14Q8TCE9 139 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 RBMXL1Q96E39 390 aaKnown RBP7.46□□□□□ -1.22
CHD7-208ENST00000528280 RHOVQ96L33 236 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 DUX3Q96PT4 197 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 HSD17B10Q99714 261 aaKnown RBP7.46□□□□□ -1.22
CHD7-208ENST00000528280 SLIRPQ9GZT3 109 aaKnown RBP7.46□□□□□ -1.22
CHD7-208ENST00000528280 ZNF355PQ9NSJ1 428 aa7.46□□□□□ -1.22
CHD7-208ENST00000528280 C13orf42A0A1B0GVH6 325 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 TMEM235A6NFC5 223 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 K7EIL1 84 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 OVOL1O14753 267 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 XRCC3O43542 346 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 IGLV2-23P01705 113 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 TRGV3P03979 118 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
CHD7-208ENST00000528280 ETV6P41212 452 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 PPP5CP53041 499 aa7.45□□□□□ -1.22
CHD7-208ENST00000528280 LINC00205P59089 165 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms