RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 TRBV6-6A0A0A6YYG2 114 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 PHF1O43189 567 aaPredicted RBP6.91□□□□□ -1.3
SOX6-210ENST00000528252 TUSC2O75896 110 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 HAND1O96004 215 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 IFNA21P01568 189 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 TFF1P04155 84 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 SEC11BP0C7V7 166 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 LYZL2Q7Z4W2 148 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 C1orf174Q8IYL3 243 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 GINS3Q9BRX5 216 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 ARV1Q9H2C2 271 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 TRAPPC2LQ9UL33 140 aa6.91□□□□□ -1.3
SOX6-210ENST00000528252 MPPED1O15442 326 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 CCL25O15444 150 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 PSPNO60542 156 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 HPRT1P00492 218 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 PF4V1P10720 104 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 HLA-DRB3P79483 266 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 LEMD1Q68G75 181 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 ZNF497Q6ZNH5 498 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 LIAT1Q6ZQX7 453 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 ZNF818PQ6ZRF7 136 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 GAPTQ8N292 157 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 CCDC71LQ8N9Z2 235 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 OR1L6Q8NGR2 347 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 PPP1R35Q8TAP8 253 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 TP53RKQ96S44 253 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 NIPSNAP3BQ9BS92 247 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 NCOR1P1Q9H4R4 102 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 HES4Q9HCC6 221 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 CCL28Q9NRJ3 127 aa6.9□□□□□ -1.3
SOX6-210ENST00000528252 CCKARP32238 428 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 GLRXP35754 106 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 MDH2P40926 338 aaKnown RBP6.9□□□□□ -1.31
SOX6-210ENST00000528252 ASCL1P50553 236 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 RAB7AP51149 207 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 TMPRSS3P57727 454 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 WDR25Q64LD2 544 aaPredicted RBP6.9□□□□□ -1.31
SOX6-210ENST00000528252 MEX3BQ6ZN04 569 aaKnown RBP6.9□□□□□ -1.31
SOX6-210ENST00000528252 MSI2Q96DH6 328 aaKnown RBP6.9□□□□□ -1.31
SOX6-210ENST00000528252 FKBP11Q9NYL4 201 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 OR1A1Q9P1Q5 309 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 ZFP30Q9Y2G7 519 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 MEMO1Q9Y316 297 aa6.9□□□□□ -1.31
SOX6-210ENST00000528252 C3orf85A0A1B0GTC6 90 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 A0A1B0GW64 132 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 CBY3A6NI87 242 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 K7N7A8 449 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 DEDDO75618 318 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 IGHV3-13P01766 116 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 MMP9P14780 707 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 CHRNB4P30926 498 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 KLF3P57682 345 aaPredicted RBP6.89□□□□□ -1.31
SOX6-210ENST00000528252 ICAM4Q14773 271 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 ACP7Q6ZNF0 438 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 TBC1D26Q86UD7 250 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 LGI3Q8N145 548 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 LFNGQ8NES3 379 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 TMEM171Q8WVE6 324 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 TAAR3PQ9P1P4 343 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 ERRFI1Q9UJM3 462 aaPredicted RBP6.89□□□□□ -1.31
SOX6-210ENST00000528252 STRAPQ9Y3F4 350 aaKnown RBP6.89□□□□□ -1.31
SOX6-210ENST00000528252 C20orf202A1L168 122 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 ZNF705FA8MVS1 300 aaPredicted RBP6.89□□□□□ -1.31
SOX6-210ENST00000528252 C1QTNF9BB2RNN3 333 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 C16orf97H3BN30 126 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 TNFSF12O43508 249 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 CD55P08174 381 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 ZNF705DP0CH99 300 aaPredicted RBP6.89□□□□□ -1.31
SOX6-210ENST00000528252 ZNF705BP0CI00 300 aaPredicted RBP6.89□□□□□ -1.31
SOX6-210ENST00000528252 PTTG1IPP53801 180 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 PRSS8Q16651 343 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 SPSB3Q6PJ21 355 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 MRGPRGQ86SM5 289 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 LRTM2Q8N967 370 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 LRRC29Q8WV35 223 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 CABLES2Q9BTV7 478 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 VAX2Q9UIW0 290 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 ZNF835Q9Y2P0 537 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 UBE2J1Q9Y385 318 aaPredicted RBP6.89□□□□□ -1.31
SOX6-210ENST00000528252 OR2W1Q9Y3N9 320 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 WSB1Q9Y6I7 421 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 PKDREJQ9NTG1 2253 aa6.89□□□□□ -1.31
SOX6-210ENST00000528252 CHD3Q12873 2000 aaKnown RBP6.88□□□□□ -1.31
SOX6-210ENST00000528252 BORCS7-ASMTA0A0B4J1R7 106 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 NKX6-3A6NJ46 265 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 SPRY3O43610 288 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 CD40P25942 277 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 P2RY1P47900 373 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 SELENOTP62341 195 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 VAMP2P63027 116 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 AESQ08117 197 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 C3orf36Q3SXR2 165 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 TDRG1Q3Y452 100 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 SPRNQ5BIV9 151 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 MOB1BQ7L9L4 216 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 H1FOOQ8IZA3 346 aaPredicted RBP6.88□□□□□ -1.31
SOX6-210ENST00000528252 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
SOX6-210ENST00000528252 C18orf12Q96KH6 178 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms