RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 RAC2P15153 192 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 MMDQ15546 238 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 WIPI1Q5MNZ9 446 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-214ENST00000528165 GUSBP11Q6P575 273 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 MCEMP1Q8IX19 187 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-214ENST00000528165 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 RNF2Q99496 336 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 OR2D2Q9H210 308 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 MSL2Q9HCI7 577 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 FOXJ2Q9P0K8 574 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 MPC1Q9Y5U8 109 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 F2Z2F3 143 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 CD1BP29016 333 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 SUMO1P63165 101 aaKnown RBP12.3□□□□□ -0.44
CAPN1-214ENST00000528165 CCL7P80098 99 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 Q0VG73 95 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 CATR1Q13166 79 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 TRA2AQ13595 282 aaKnown RBP eCLIP12.3□□□□□ -0.44
CAPN1-214ENST00000528165 FBXW9Q5XUX1 488 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 H2BFWTQ7Z2G1 175 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 WDR83OSQ9Y284 106 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 SLC17A3O00476 420 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 OR2H2O95918 312 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 ARL14EPLP0DKL9 152 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 IER3P46695 156 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 RPL30P62888 115 aaKnown RBP12.29□□□□□ -0.44
CAPN1-214ENST00000528165 ZBTB34Q8NCN2 500 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 PKIBQ9C010 78 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 FBXL7Q9UJT9 491 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 WDR87Q6ZQQ6 2873 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 SNURFLB1AK76 121 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 RFPL3SP0C7P2 107 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 GNG10P50151 68 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 ARL6IP6Q8N6S5 226 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 Q8N7P7 452 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 LRFN3Q9BTN0 628 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 TRIOO75962 3097 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 C20orf202A1L168 122 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 A8MXE2 369 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-214ENST00000528165 LTBRP36941 435 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 SPATA45Q537H7 98 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 ANKRD39Q53RE8 183 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 KRTCAP3Q53RY4 240 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 OCIAD1Q9NX40 245 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 SLC45A2Q9UMX9 530 aa12.29□□□□□ -0.44
CAPN1-214ENST00000528165 J3QT63 122 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 CLDN14O95500 239 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 GPX1P07203 203 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 CA6P23280 308 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 HLA-DRB5Q30154 266 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 TMEM45BQ96B21 275 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 MBNL3Q9NUK0 354 aaKnown RBP12.28□□□□□ -0.44
CAPN1-214ENST00000528165 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 RAB29O14966 203 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 SS18L1O75177 396 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-214ENST00000528165 CXorf1O96002 111 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 TRIP6Q15654 476 aaKnown RBP12.28□□□□□ -0.44
CAPN1-214ENST00000528165 TMPRSS7Q7RTY8 843 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 C1orf174Q8IYL3 243 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 TXN2Q99757 166 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 KCNIP1Q9NZI2 227 aa12.28□□□□□ -0.44
CAPN1-214ENST00000528165 ESPL1Q14674 2120 aa12.27□□□□□ -0.44
CAPN1-214ENST00000528165 C17orf98A8MV24 154 aa12.27□□□□□ -0.44
CAPN1-214ENST00000528165 LGALS4P56470 323 aa12.27□□□□□ -0.44
CAPN1-214ENST00000528165 IGFBP7Q16270 282 aa12.27□□□□□ -0.44
CAPN1-214ENST00000528165 RPEL1Q2QD12 228 aa12.27□□□□□ -0.44
CAPN1-214ENST00000528165 STARD4Q96DR4 205 aa12.27□□□□□ -0.44
CAPN1-214ENST00000528165 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.44
CAPN1-214ENST00000528165 PPIAL4AQ9Y536 164 aa12.27□□□□□ -0.44
CAPN1-214ENST00000528165 ZNF503-AS2A6NEH8 195 aa12.27□□□□□ -0.45
CAPN1-214ENST00000528165 C15orf62A8K5M9 175 aa12.27□□□□□ -0.45
CAPN1-214ENST00000528165 GDF9O60383 454 aa12.27□□□□□ -0.45
CAPN1-214ENST00000528165 TDGF1P13385 188 aa12.27□□□□□ -0.45
CAPN1-214ENST00000528165 HTD2P86397 168 aa12.27□□□□□ -0.45
CAPN1-214ENST00000528165 ZNF703Q9H7S9 590 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-214ENST00000528165 GNB4Q9HAV0 340 aa12.27□□□□□ -0.45
CAPN1-214ENST00000528165 RNF114Q9Y508 228 aa12.27□□□□□ -0.45
CAPN1-214ENST00000528165 TRBV9A0A0B4J1U6 114 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 OR5G3P0C626 314 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 CTRLP40313 264 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 AMTP48728 403 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 HNRNPA3P51991 378 aaKnown RBP12.26□□□□□ -0.45
CAPN1-214ENST00000528165 ZXDAP98168 799 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 PLP2Q04941 152 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 PDLIM3Q53GG5 364 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-214ENST00000528165 Q6ZN92 141 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 STPG4Q8N801 248 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 GALMQ96C23 342 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 POM121L2Q96KW2 1035 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 YLPM1P49750 1951 aaKnown RBP12.26□□□□□ -0.45
CAPN1-214ENST00000528165 USF3Q68DE3 2245 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 K7EN84 100 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 MPDU1O75352 247 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 NEURL1O76050 574 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 STAG3L2P0CL84 134 aa12.26□□□□□ -0.45
CAPN1-214ENST00000528165 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms