RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 NANOGP1Q8N7R0 232 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 NEURL2Q9BR09 285 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 URM1Q9BTM9 101 aaKnown RBP12.19□□□□□ -0.46
PTPRU-210ENST00000527027 RDH8Q9NYR8 311 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 HSF4Q9ULV5 492 aa12.19□□□□□ -0.46
PTPRU-210ENST00000527027 ALMS1Q8TCU4 4167 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 ZNF785A8K8V0 405 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 RBMXL2O75526 392 aaKnown RBP12.18□□□□□ -0.46
PTPRU-210ENST00000527027 CD300EQ496F6 205 aaPredicted RBP12.18□□□□□ -0.46
PTPRU-210ENST00000527027 LAX1Q8IWV1 398 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 TSPAN14Q8NG11 270 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 OR6M1Q8NGM8 313 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 HARBI1Q96MB7 349 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 C12orf4Q9NQ89 552 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
PTPRU-210ENST00000527027 RBMY1BA6NDE4 496 aaKnown RBP12.17□□□□□ -0.46
PTPRU-210ENST00000527027 RBMY1EA6NEQ0 496 aaKnown RBP12.17□□□□□ -0.46
PTPRU-210ENST00000527027 SRRM4A7MD48 611 aaKnown RBP12.17□□□□□ -0.46
PTPRU-210ENST00000527027 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
PTPRU-210ENST00000527027 RBMY1DP0C7P1 496 aaKnown RBP12.17□□□□□ -0.46
PTPRU-210ENST00000527027 APELAP0DMC3 54 aa12.17□□□□□ -0.46
PTPRU-210ENST00000527027 TMEM50BP56557 158 aa12.17□□□□□ -0.46
PTPRU-210ENST00000527027 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
PTPRU-210ENST00000527027 IRF3Q14653 427 aa12.17□□□□□ -0.46
PTPRU-210ENST00000527027 ZNF367Q7RTV3 350 aa12.17□□□□□ -0.46
PTPRU-210ENST00000527027 DEFB125Q8N687 156 aa12.17□□□□□ -0.46
PTPRU-210ENST00000527027 ADAD2Q8NCV1 583 aaKnown RBP12.17□□□□□ -0.46
PTPRU-210ENST00000527027 PHB2Q99623 299 aa12.17□□□□□ -0.46
PTPRU-210ENST00000527027 CMSS1Q9BQ75 279 aaKnown RBP12.17□□□□□ -0.46
PTPRU-210ENST00000527027 FOXI3A8MTJ6 420 aaPredicted RBP12.16□□□□□ -0.46
PTPRU-210ENST00000527027 BMPR1BO00238 502 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 SHOXO15266 292 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 CD7P09564 240 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 SERPINB10P48595 397 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 CBX3Q13185 183 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 SPHARQ15513 63 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 MED22Q15528 200 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 MRGPRG-AS1Q2M3A8 158 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 HSD17B12Q53GQ0 312 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 TMEM177Q53S58 311 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 CEACAM19Q7Z692 300 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 SPARTQ8N0X7 666 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 PECRQ9BY49 303 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 SDHAF2Q9NX18 166 aa12.16□□□□□ -0.46
PTPRU-210ENST00000527027 OR11H12B2RN74 326 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 OR9G9P0C7N8 305 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 RHOGP84095 191 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 ATP5G2Q06055 141 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 P2RY14Q15391 338 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 TEX45Q8NA69 505 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 ARHGAP5-AS1Q96IT6 56 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 OR2D2Q9H210 308 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 SRD5A3Q9H8P0 318 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 ACOT13Q9NPJ3 140 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 AKIP1Q9NQ31 210 aa12.15□□□□□ -0.46
PTPRU-210ENST00000527027 TRBV9A0A0B4J1U6 114 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 FAM223BA6NKX1 122 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 UCHL1P09936 223 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 RRASP10301 218 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 MLLT11Q13015 90 aaPredicted RBP12.14□□□□□ -0.47
PTPRU-210ENST00000527027 PRSS8Q16651 343 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 RTL8BQ17RB0 113 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 VMA21Q3ZAQ7 101 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 FAM223AQ8IWN6 122 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 OR4A4PQ8NGN8 299 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 DYNLRB2Q8TF09 96 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 SRSF12Q8WXF0 261 aaKnown RBP12.14□□□□□ -0.47
PTPRU-210ENST00000527027 MRPS26Q9BYN8 205 aaKnown RBP12.14□□□□□ -0.47
PTPRU-210ENST00000527027 PLGRKTQ9HBL7 147 aa12.14□□□□□ -0.47
PTPRU-210ENST00000527027 ZNF230Q9UIE0 474 aaPredicted RBP12.14□□□□□ -0.47
PTPRU-210ENST00000527027 SLC17A2O00624 439 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 BET1O15155 118 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 MPPED1O15442 326 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 TUSC2O75896 110 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 PRH1P02810 166 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 CD3GP09693 182 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 KIR2DS2P43631 304 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 UBE2KP61086 200 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
PTPRU-210ENST00000527027 TRAM1Q15629 374 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 TNXAQ16473 311 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 GUCA2BQ16661 112 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 UBE2UQ5VVX9 321 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 OR10J5Q8NHC4 309 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 UFD1Q92890 307 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
PTPRU-210ENST00000527027 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
PTPRU-210ENST00000527027 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.12□□□□□ -0.47
PTPRU-210ENST00000527027 FABP7O15540 132 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 FOLR2P14207 255 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 PSMA1P25786 263 aaKnown RBP12.12□□□□□ -0.47
PTPRU-210ENST00000527027 ZNF45Q02386 682 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 TPBGQ13641 420 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 IGSF11Q5DX21 431 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 OR56B1Q8NGI3 324 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
PTPRU-210ENST00000527027 LINC00476Q8WZB0 136 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms